TY - JOUR
T1 - Learning dependence from samples
AU - Seth, Sohan
AU - Príncipe, José C.
PY - 2014
Y1 - 2014
N2 - Mutual information, conditional mutual information and interaction information have been widely used in scientific literature as measures of dependence, conditional dependence and mutual dependence. However, these concepts suffer from several computational issues; they are difficult to estimate in continuous domain, the existing regularised estimators are almost always defined only for real or vector-valued random variables, and these measures address what dependence, conditional dependence and mutual dependence imply in terms of the random variables but not finite realisations. In this paper, we address the issue that given a set of realisations in an arbitrary metric space, what characteristic makes them dependent, conditionally dependent or mutually dependent. With this novel understanding, we develop new estimators of association, conditional association and interaction association. Some attractive properties of these estimators are that they do not require choosing free parameter(s), they are computationally simpler, and they can be applied to arbitrary metric spaces.
AB - Mutual information, conditional mutual information and interaction information have been widely used in scientific literature as measures of dependence, conditional dependence and mutual dependence. However, these concepts suffer from several computational issues; they are difficult to estimate in continuous domain, the existing regularised estimators are almost always defined only for real or vector-valued random variables, and these measures address what dependence, conditional dependence and mutual dependence imply in terms of the random variables but not finite realisations. In this paper, we address the issue that given a set of realisations in an arbitrary metric space, what characteristic makes them dependent, conditionally dependent or mutually dependent. With this novel understanding, we develop new estimators of association, conditional association and interaction association. Some attractive properties of these estimators are that they do not require choosing free parameter(s), they are computationally simpler, and they can be applied to arbitrary metric spaces.
KW - Association
KW - Causality
KW - Conditional association
KW - Conditional dependence
KW - Conditional mutual information
KW - Dependence
KW - Interaction association
KW - Interaction information
KW - Metric space
KW - Mutual dependence
KW - Mutual information
KW - Variable selection
UR - http://www.scopus.com/inward/record.url?scp=84892898392&partnerID=8YFLogxK
U2 - 10.1504/IJBRA.2014.058777
DO - 10.1504/IJBRA.2014.058777
M3 - Article
C2 - 24449692
AN - SCOPUS:84892898392
SN - 1744-5485
VL - 10
SP - 43
EP - 58
JO - INTERNATIONAL JOURNAL OF BIOINFORMATICS RESEARCH AND APPLICATIONS
JF - INTERNATIONAL JOURNAL OF BIOINFORMATICS RESEARCH AND APPLICATIONS
IS - 1
ER -