DNA origami design and implementation: the Romanian map

Laura Ioana Popa; Ana-Maria Dobre; Corina Itcus; Alexandru Amarioarei; Andrei Paun; Mihaela Paun; Felician Pop; Iris Tusa; Kha Minh-Kha Nguyen; Anton Kuzyk; Eugen Czeizler

doi:10.25083/rbl/25.4/1816.1822

DNA origami design and implementation: the Romanian map

Laura Ioana Popa, Ana-Maria Dobre, Corina Itcus^*, Alexandru Amarioarei, Andrei Paun, Mihaela Paun, Felician Pop, Iris Tusa, Minh-Kha Nguyen, Anton Kuzyk, Eugen Czeizler

^*Tämän työn vastaava kirjoittaja

Neurotieteen ja lääketieteellisen tekniikan laitos

Tutkimustuotos: Lehtiartikkeli › Article › Scientific › vertaisarvioitu

292 Lataukset (Pure)

Abstrakti

Since its introduction in the early 2000s, DNA origami had a big impact on the development of nanotechnology by gathering numerous applications. During this time, many tools were designed and used to generate arbitrary shapes capable of self-assembly which make this technique more approachable. In this paper, we have created the map of Romania at nanoscale dimensions by using a new open-source software - PERDIX. For this purpose, we used a scaffold strand with a length of 6959 nucleotides and 162 staple strands with a variable length ranging between 20 and 63 nucleotides. All the computational tools that were used in this experiment are open-source and user-friendly.

Alkuperäiskieli	Englanti
Sivut	1816-1822
Sivumäärä	7
Julkaisu	Romanian Biotechnology Letters
Vuosikerta	25
Numero	4
DOI - pysyväislinkit	https://doi.org/10.25083/rbl/25.4/1816.1822
Tila	Julkaistu - 2020
OKM-julkaisutyyppi	A1 Alkuperäisartikkeli tieteellisessä aikakauslehdessä

Rahoitus

This work was supported by a grant of the Romanian National Authority for Scientific Research and Innovation, project number POC P-37-257.

Pääsy asiakirjaan

10.25083/rbl/25.4/1816.1822

DNA_Origami_Design.19Final published version, 620 KBLisenssi: CC BY-NC-ND

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title = "DNA origami design and implementation: the Romanian map",

abstract = "Since its introduction in the early 2000s, DNA origami had a big impact on the development of nanotechnology by gathering numerous applications. During this time, many tools were designed and used to generate arbitrary shapes capable of self-assembly which make this technique more approachable. In this paper, we have created the map of Romania at nanoscale dimensions by using a new open-source software - PERDIX. For this purpose, we used a scaffold strand with a length of 6959 nucleotides and 162 staple strands with a variable length ranging between 20 and 63 nucleotides. All the computational tools that were used in this experiment are open-source and user-friendly.",

keywords = "DNA origami, nanotechnology, nanostructure, DNA Romanian map, Perdix visualization, FOLDING DNA, NANOSCALE, SHAPES",

author = "Popa, \{Laura Ioana\} and Ana-Maria Dobre and Corina Itcus and Alexandru Amarioarei and Andrei Paun and Mihaela Paun and Felician Pop and Iris Tusa and \{Minh-Kha Nguyen\} and Anton Kuzyk and Eugen Czeizler",

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doi = "10.25083/rbl/25.4/1816.1822",

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TY - JOUR

T1 - DNA origami design and implementation

T2 - the Romanian map

AU - Popa, Laura Ioana

AU - Dobre, Ana-Maria

AU - Itcus, Corina

AU - Amarioarei, Alexandru

AU - Paun, Andrei

AU - Paun, Mihaela

AU - Pop, Felician

AU - Tusa, Iris

AU - Minh-Kha Nguyen, null

AU - Kuzyk, Anton

AU - Czeizler, Eugen

PY - 2020

Y1 - 2020

N2 - Since its introduction in the early 2000s, DNA origami had a big impact on the development of nanotechnology by gathering numerous applications. During this time, many tools were designed and used to generate arbitrary shapes capable of self-assembly which make this technique more approachable. In this paper, we have created the map of Romania at nanoscale dimensions by using a new open-source software - PERDIX. For this purpose, we used a scaffold strand with a length of 6959 nucleotides and 162 staple strands with a variable length ranging between 20 and 63 nucleotides. All the computational tools that were used in this experiment are open-source and user-friendly.

AB - Since its introduction in the early 2000s, DNA origami had a big impact on the development of nanotechnology by gathering numerous applications. During this time, many tools were designed and used to generate arbitrary shapes capable of self-assembly which make this technique more approachable. In this paper, we have created the map of Romania at nanoscale dimensions by using a new open-source software - PERDIX. For this purpose, we used a scaffold strand with a length of 6959 nucleotides and 162 staple strands with a variable length ranging between 20 and 63 nucleotides. All the computational tools that were used in this experiment are open-source and user-friendly.

KW - DNA origami

KW - nanotechnology

KW - nanostructure

KW - DNA Romanian map

KW - Perdix visualization

KW - FOLDING DNA

KW - NANOSCALE

KW - SHAPES

U2 - 10.25083/rbl/25.4/1816.1822

DO - 10.25083/rbl/25.4/1816.1822

M3 - Article

SN - 1224-5984

VL - 25

SP - 1816

EP - 1822

JO - Romanian Biotechnology Letters

JF - Romanian Biotechnology Letters

IS - 4

ER -

DNA origami design and implementation: the Romanian map

Abstrakti

Rahoitus

Pääsy asiakirjaan

Sormenjälki

Laitteet

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