Abstract
While tractography is widely used in brain imaging research,its quantitative validation is highly difficult. Many fiber systems,however,have well-known topographic organization which can even be quantitatively mapped such as the retinotopy of visual pathway. Motivated by this previously untapped anatomical knowledge,we develop a novel tractography method that preserves both topographic and geometric regularity of fiber systems. For topographic preservation,we propose a novel likelihood function that tests the match between parallel curves and fiber orientation distributions. For geometric regularity,we use Gaussian distributions of Frenet-Serret frames. Taken together,we develop a Bayesian framework for generating highly organized tracks that accurately follow neuroanatomy. Using multi-shell diffusion images of 56 subjects from Human Connectome Project,we compare our method with algorithms from MRtrix. By applying regression analysis between retinotopic eccentricity and tracks,we quantitatively demonstrate that our method achieves superior performance in preserving the retinotopic organization of optic radiation.
| Original language | English |
|---|---|
| Title of host publication | Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Proceedings |
| Publisher | Springer |
| Pages | 201-209 |
| Number of pages | 9 |
| ISBN (Print) | 9783319467191 |
| DOIs | |
| Publication status | Published - 1 Jan 2016 |
| MoE publication type | A4 Conference publication |
| Event | International Workshop on Simulation and Synthesis in Medical Imaging - Athens, Greece Duration: 21 Oct 2016 → 21 Oct 2016 Conference number: 1 |
Publication series
| Name | Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) |
|---|---|
| Volume | 9900 LNCS |
| ISSN (Print) | 0302-9743 |
| ISSN (Electronic) | 1611-3349 |
Workshop
| Workshop | International Workshop on Simulation and Synthesis in Medical Imaging |
|---|---|
| Abbreviated title | SASHIMI |
| Country/Territory | Greece |
| City | Athens |
| Period | 21/10/2016 → 21/10/2016 |
Funding
This work was in part supported by the National Institute of Health (NIH) under Grant K01EB013633,P41EB015922,P50AG005142,U01EY025864,U01AG051218.
Keywords
- Bayesian inference
- Probabilistic tractography
- Visual pathway
Fingerprint
Dive into the research topics of 'Probabilistic tractography for topographically organized connectomes'. Together they form a unique fingerprint.Cite this
- APA
- Author
- BIBTEX
- Harvard
- Standard
- RIS
- Vancouver