MPSCAN: fast localisation of multiple reads in genomes

Eric Rivals, Leena Salmela, Petteri Kiiskinen, Petri Kalsi, Jorma Tarhio

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    16 Citations (Scopus)
    Original languageEnglish
    Title of host publicationWABI 2009, 9th Workshop on Algorithms in Bioinformatics, Philadelphia, USA, September 12-13
    EditorsSteven L. Salzberg, Tandy Warnow
    Place of PublicationBerlin, Germany
    Pages246-260
    Publication statusPublished - 2009
    MoE publication typeA4 Article in a conference publication

    Publication series

    Name
    PublisherSpringer
    ISSN (Print)0302-9743
    ISSN (Electronic)1611-3349

    Keywords

    • average complexity
    • filtration
    • High-throughput Sequencing
    • scalability
    • set pattern matching

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