Projects per year
Abstract
We present a soft-potential-enhanced Poisson-Boltzmann (SPB) theory to efficiently capture ion distributions and electrostatic potential around rodlike charged macromolecules. The SPB model is calibrated with a coarse-grained particle-based model for polyelectrolytes (PEs) in monovalent salt solutions as well as compared to a full atomistic molecular dynamics simulation with the explicit solvent. We demonstrate that our modification enables the SPB theory to accurately predict monovalent ion distributions around a rodlike PE in a wide range of ion and charge distribution conditions in the weak-coupling regime. These include excess salt concentrations up to 1M and ion sizes ranging from small ions, such as Na+ or Cl-, to softer and larger ions with a size comparable to the PE diameter. The work provides a simple way to implement an enhancement that effectively captures the influence of ion size and species into the PB theory in the context of PEs in aqueous salt solutions.
Original language | English |
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Article number | 214906 |
Number of pages | 11 |
Journal | Journal of Chemical Physics |
Volume | 156 |
Issue number | 21 |
DOIs | |
Publication status | Published - 7 Jun 2022 |
MoE publication type | A1 Journal article-refereed |
Keywords
- MOLECULAR-DYNAMICS
- COUNTERION CONDENSATION
- MONTE-CARLO
- BIOMOLECULAR ELECTROSTATICS
- ONE-COMPONENT
- FREE-ENERGY
- DNA
- EQUATION
- BINDING
- POTENTIALS
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Dive into the research topics of 'Modified Poisson-Boltzmann theory for polyelectrolytes in monovalent salt solutions with finite-size ions'. Together they form a unique fingerprint.-
FinnCERES: Competence Center for the Materials Bioeconomy: A Flagship for our Sustainable Future
Hämäläinen, J. (Principal investigator)
01/05/2022 → 30/06/2026
Project: Academy of Finland: Other research funding
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LIBER Sammalkorpi: Life-like hybrid materials Sammalkorpi
Sammalkorpi, M. (Principal investigator), Hasheminejad, K. (Project Member), Holl, M. (Project Member), Kastinen, T. (Project Member), Morais Jaques, Y. (Project Member), Harmat, A. (Project Member) & Scacchi, A. (Project Member)
01/01/2022 → 31/12/2024
Project: Academy of Finland: Other research funding
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PolyDyna: Coarse-Grained Modeling of Translocation and Polymer Dynamics in Nanofluidic Systems
Ala-Nissilä, T. (Principal investigator), Achim, C. (Project Member), Alipour, S. (Project Member), Alcanzare, M. (Project Member), Muhli, H. (Project Member), Seyedheydari, F. (Project Member), Molla, J. (Project Member), Hirvonen, P. (Project Member), Babu, A. (Project Member), Hashemi Petrudi, A. (Project Member), Vadimov, V. (Project Member), Ferreira Sampaio, R. (Project Member), Conley, K. (Project Member) & Fan, Z. (Project Member)
01/09/2017 → 31/12/2021
Project: Academy of Finland: Other research funding
Equipment
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Raw Materials Research Infrastructure
Karppinen, M. (Manager)
School of Chemical EngineeringFacility/equipment: Facility
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