High-resolution contrast enhanced multi-phase hepatic computed tomography data fromaporcine Radio-Frequency Ablation study

Bernhard Kainz; Philip Voglreiter; Michael Sereinigg; Iris Wiederstein-Grasser; Ursula Mayrhauser; Sonja Köstenbauer; Mika Pollari; Rostislav Khlebnikov; Matthias Seise; Tuomas Alhonnoro; Yrjö Häme; Daniel Seider; Ronan Flanagan; Claire Bost; Judith Mühl; David "O'Neill"; Tingying Peng; Stephen Payne; Daniel Rueckert; Dieter Schmalstieg; Michael Moche; Marina Kolesnik; Philipp Stiegler; Horst Rupert Portugaller

doi:10.1109/ISBI.2014.6867814

High-resolution contrast enhanced multi-phase hepatic computed tomography data fromaporcine Radio-Frequency Ablation study

Bernhard Kainz, Philip Voglreiter, Michael Sereinigg, Iris Wiederstein-Grasser, Ursula Mayrhauser, Sonja Köstenbauer, Mika Pollari, Rostislav Khlebnikov, Matthias Seise, Tuomas Alhonnoro, Yrjö Häme, Daniel Seider, Ronan Flanagan, Claire Bost, Judith Mühl, David "O'Neill", Tingying Peng, Stephen Payne, Daniel Rueckert, Dieter SchmalstiegMichael Moche, Marina Kolesnik, Philipp Stiegler, Horst Rupert Portugaller

Research output: Chapter in Book/Report/Conference proceeding › Conference article in proceedings › Scientific › peer-review

3 Citations (Scopus)

Abstract

Data below 1 mm voxel size is getting more and more common in the clinical practice but it is still hard to obtain a consistent collection of such datasets for medical image processing research. With this paper we provide a large collection of Contrast Enhanced (CE) Computed Tomography (CT) data from porcine animal experiments and describe their acquisition procedure and peculiarities. We have acquired three CE-CT phases at the highest available scanner resolution of 57 porcine livers during induced respiratory arrest. These phases capture contrast enhanced hepatic arteries, portal venous veins and hepatic veins. Therefore, we provide scan data that allows for a highly accurate reconstruction of hepatic vessel trees. Several datasets have been acquired during Radio-Frequency Ablation (RFA) experiments. Hence, many datasets show also artificially induced hepatic lesions, which can be used for the evaluation of structure detection methods.

Original language	English
Title of host publication	2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014
Publisher	IEEE
Pages	81-84
Number of pages	4
ISBN (Electronic)	9781467319591
DOIs	https://doi.org/10.1109/ISBI.2014.6867814
Publication status	Published - 29 Jul 2014
MoE publication type	A4 Conference publication
Event	IEEE International Symposium on Biomedical Imaging - Beijing, China Duration: 29 Apr 2014 → 2 May 2014 Conference number: 11

Conference

Conference	IEEE International Symposium on Biomedical Imaging
Abbreviated title	ISBI
Country/Territory	China
City	Beijing
Period	29/04/2014 → 02/05/2014

Keywords

Contrast enhanced computed tomography
Liver tumor ablation
Porcine study data

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10.1109/ISBI.2014.6867814

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Kainz, B., Voglreiter, P., Sereinigg, M., Wiederstein-Grasser, I., Mayrhauser, U., Köstenbauer, S., Pollari, M., Khlebnikov, R., Seise, M., Alhonnoro, T., Häme, Y., Seider, D., Flanagan, R., Bost, C., Mühl, J., "O'Neill", D., Peng, T., Payne, S., Rueckert, D., ... Portugaller, H. R. (2014). High-resolution contrast enhanced multi-phase hepatic computed tomography data fromaporcine Radio-Frequency Ablation study. In 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014 (pp. 81-84). Article 6867814 IEEE. https://doi.org/10.1109/ISBI.2014.6867814

@inproceedings{2fd20168dc6b4edca5993c9f167c3157,

title = "High-resolution contrast enhanced multi-phase hepatic computed tomography data fromaporcine Radio-Frequency Ablation study",

abstract = "Data below 1 mm voxel size is getting more and more common in the clinical practice but it is still hard to obtain a consistent collection of such datasets for medical image processing research. With this paper we provide a large collection of Contrast Enhanced (CE) Computed Tomography (CT) data from porcine animal experiments and describe their acquisition procedure and peculiarities. We have acquired three CE-CT phases at the highest available scanner resolution of 57 porcine livers during induced respiratory arrest. These phases capture contrast enhanced hepatic arteries, portal venous veins and hepatic veins. Therefore, we provide scan data that allows for a highly accurate reconstruction of hepatic vessel trees. Several datasets have been acquired during Radio-Frequency Ablation (RFA) experiments. Hence, many datasets show also artificially induced hepatic lesions, which can be used for the evaluation of structure detection methods.",

keywords = "Contrast enhanced computed tomography, Liver tumor ablation, Porcine study data",

author = "Bernhard Kainz and Philip Voglreiter and Michael Sereinigg and Iris Wiederstein-Grasser and Ursula Mayrhauser and Sonja K{\"o}stenbauer and Mika Pollari and Rostislav Khlebnikov and Matthias Seise and Tuomas Alhonnoro and Yrj{\"o} H{\"a}me and Daniel Seider and Ronan Flanagan and Claire Bost and Judith M{\"u}hl and David {"}O'Neill{"} and Tingying Peng and Stephen Payne and Daniel Rueckert and Dieter Schmalstieg and Michael Moche and Marina Kolesnik and Philipp Stiegler and Portugaller, {Horst Rupert}",

year = "2014",

month = jul,

day = "29",

doi = "10.1109/ISBI.2014.6867814",

language = "English",

pages = "81--84",

booktitle = "2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014",

publisher = "IEEE",

address = "United States",

note = "IEEE International Symposium on Biomedical Imaging, ISBI ; Conference date: 29-04-2014 Through 02-05-2014",

}

Kainz, B, Voglreiter, P, Sereinigg, M, Wiederstein-Grasser, I, Mayrhauser, U, Köstenbauer, S, Pollari, M, Khlebnikov, R, Seise, M, Alhonnoro, T, Häme, Y, Seider, D, Flanagan, R, Bost, C, Mühl, J, "O'Neill", D, Peng, T, Payne, S, Rueckert, D, Schmalstieg, D, Moche, M, Kolesnik, M, Stiegler, P & Portugaller, HR 2014, High-resolution contrast enhanced multi-phase hepatic computed tomography data fromaporcine Radio-Frequency Ablation study. in 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014., 6867814, IEEE, pp. 81-84, IEEE International Symposium on Biomedical Imaging, Beijing, China, 29/04/2014. https://doi.org/10.1109/ISBI.2014.6867814

High-resolution contrast enhanced multi-phase hepatic computed tomography data fromaporcine Radio-Frequency Ablation study. / Kainz, Bernhard; Voglreiter, Philip; Sereinigg, Michael et al.
2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014. IEEE, 2014. p. 81-84 6867814.

Research output: Chapter in Book/Report/Conference proceeding › Conference article in proceedings › Scientific › peer-review

TY - GEN

T1 - High-resolution contrast enhanced multi-phase hepatic computed tomography data fromaporcine Radio-Frequency Ablation study

AU - Kainz, Bernhard

AU - Voglreiter, Philip

AU - Sereinigg, Michael

AU - Wiederstein-Grasser, Iris

AU - Mayrhauser, Ursula

AU - Köstenbauer, Sonja

AU - Pollari, Mika

AU - Khlebnikov, Rostislav

AU - Seise, Matthias

AU - Alhonnoro, Tuomas

AU - Häme, Yrjö

AU - Seider, Daniel

AU - Flanagan, Ronan

AU - Bost, Claire

AU - Mühl, Judith

AU - "O'Neill", David

AU - Peng, Tingying

AU - Payne, Stephen

AU - Rueckert, Daniel

AU - Schmalstieg, Dieter

AU - Moche, Michael

AU - Kolesnik, Marina

AU - Stiegler, Philipp

AU - Portugaller, Horst Rupert

N1 - Conference code: 11

PY - 2014/7/29

Y1 - 2014/7/29

N2 - Data below 1 mm voxel size is getting more and more common in the clinical practice but it is still hard to obtain a consistent collection of such datasets for medical image processing research. With this paper we provide a large collection of Contrast Enhanced (CE) Computed Tomography (CT) data from porcine animal experiments and describe their acquisition procedure and peculiarities. We have acquired three CE-CT phases at the highest available scanner resolution of 57 porcine livers during induced respiratory arrest. These phases capture contrast enhanced hepatic arteries, portal venous veins and hepatic veins. Therefore, we provide scan data that allows for a highly accurate reconstruction of hepatic vessel trees. Several datasets have been acquired during Radio-Frequency Ablation (RFA) experiments. Hence, many datasets show also artificially induced hepatic lesions, which can be used for the evaluation of structure detection methods.

AB - Data below 1 mm voxel size is getting more and more common in the clinical practice but it is still hard to obtain a consistent collection of such datasets for medical image processing research. With this paper we provide a large collection of Contrast Enhanced (CE) Computed Tomography (CT) data from porcine animal experiments and describe their acquisition procedure and peculiarities. We have acquired three CE-CT phases at the highest available scanner resolution of 57 porcine livers during induced respiratory arrest. These phases capture contrast enhanced hepatic arteries, portal venous veins and hepatic veins. Therefore, we provide scan data that allows for a highly accurate reconstruction of hepatic vessel trees. Several datasets have been acquired during Radio-Frequency Ablation (RFA) experiments. Hence, many datasets show also artificially induced hepatic lesions, which can be used for the evaluation of structure detection methods.

KW - Contrast enhanced computed tomography

KW - Liver tumor ablation

KW - Porcine study data

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U2 - 10.1109/ISBI.2014.6867814

DO - 10.1109/ISBI.2014.6867814

M3 - Conference article in proceedings

AN - SCOPUS:84927947107

SP - 81

EP - 84

BT - 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014

PB - IEEE

T2 - IEEE International Symposium on Biomedical Imaging

Y2 - 29 April 2014 through 2 May 2014

ER -

High-resolution contrast enhanced multi-phase hepatic computed tomography data fromaporcine Radio-Frequency Ablation study

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Keywords

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