Yingying Xu

Postdoctoral Researcher

Research outputs

  1. 2020
  2. Published

    High-dimensional structure learning of binary pairwise Markov networks: A comparative numerical study

    Pensar, J., Xu, Y., Puranen, S., Pesonen, M., Kabashima, Y. & Corander, J., 1 Jan 2020, In : Computational Statistics and Data Analysis. 141, p. 62-76 15 p.

    Research output: Contribution to journalArticleScientificpeer-review

  3. 2019
  4. Published

    Genome-wide epistasis and co-selection study using mutual information

    Pensar, J., Puranen, S., Arnold, B., MacAlasdair, N., Kuronen, J., Tonkin-Hill, G., Pesonen, M., Xu, Y., Sipola, A., Sánchez-Busó, L. & 7 othersLees, J. A., Chewapreecha, C., Bentley, S. D., Harris, S. R., Parkhill, J., Croucher, N. J. & Corander, J., 10 Oct 2019, In : Nucleic Acids Research. 47, 18, p. 1-14 e112.

    Research output: Contribution to journalArticleScientificpeer-review

  5. 2018
  6. Published

    Inverse finite-size scaling for high-dimensional significance analysis

    Xu, Y., Puranen, S., Corander, J. & Kabashima, Y., 6 Jun 2018, In : Physical Review E. 97, 6, p. 1-9 062112.

    Research output: Contribution to journalArticleScientificpeer-review

  7. Published

    Approximate message passing for nonconvex sparse regularization with stability and asymptotic analysis

    Sakata, A. & Xu, Y., 13 Mar 2018, In : Journal of Statistical Mechanics: Theory and Experiment. 2018, 3, p. 1-35 033404.

    Research output: Contribution to journalArticleScientificpeer-review

  8. 2017
  9. Published

    Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis

    Skwark, M. J., Croucher, N. J., Puranen, S., Chewapreecha, C., Pesonen, M., Xu, Y., Turner, P., Harris, S. R., Beres, S. B., Musser, J. M. & 4 othersParkhill, J., Bentley, S. D., Aurell, E. & Corander, J., 1 Feb 2017, In : PLoS Genetics. 13, 2, e1006508.

    Research output: Contribution to journalArticleScientificpeer-review

  10. Published

    SuperDCA for genome-wide epistasis analysis

    Puranen, S., Pesonen, M., Pensar, J., Xu, Y. Y., Lees, J. A., Bentley, S. D., Croucher, N. J., Corander, J. & Aurell, E., 2017, In : bioRxiv.

    Research output: Contribution to journalArticleScientific

  11. 2016
  12. Published

    Statistical mechanics analysis of thresholding 1-bit compressed sensing

    Xu, Y. & Kabashima, Y., 22 Aug 2016, In : Journal of Statistical Mechanics: Theory and Experiment. 2016, 8, p. 1-16 083405.

    Research output: Contribution to journalArticleScientificpeer-review

ID: 2068828