Research output per year
Research output per year
Personal profile
Artistic and research interests
My main webpage is at https://kaski-lab.com
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
Education/Academic qualification
Doctoral degree, Engineering and Technology, Helsinki University of Technology
Award Date: 22 Apr 1997
Master's degree, Engineering and Technology, Helsinki University of Technology
Award Date: 9 Mar 1993
Keywords
- machine learning
- probabilistic modelling
- artificial intelligence
- bioinformatics
- computational medicine
- user interaction
- brain signal analysis
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Amortized Bayesian Experimental Design for Decision-Making
Huang, D., Guo, Y., Acerbi, L. & Kaski, S., 2024, (Accepted/In press) Advances in Neural Information Processing Systems 37 - 38th Conference on Neural Information Processing Systems, NeurIPS 2024. Neural Information Processing Systems Foundation, 19 p.Research output: Chapter in Book/Report/Conference proceeding › Conference article in proceedings › Scientific › peer-review
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Balancing Imbalanced Toxicity Models : Using MolBERT with Focal Loss
Masood, M. A., Kaski, S., Ceulemans, H., Herman, D. & Heinonen, M., 2025, AI in Drug Discovery - 1st International Workshop, AIDD 2024, Held in Conjunction with ICANN 2024, Proceedings. Clevert, D.-A., Wand, M., Schmidhuber, J., Malinovská, K. & Tetko, I. V. (eds.). Springer, p. 82-97 16 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 14894 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Conference article in proceedings › Scientific › peer-review
Open AccessFile25 Downloads (Pure) -
Bayesian Active Learning in the Presence of Nuisance Parameters
Sloman, S. J., Bharti, A., Martinelli, J. & Kaski, S., 2024, Proceedings of the Fortieth Conference on Uncertainty in Artificial Intelligence. JMLR, p. 3245-3263 (Proceedings of Machine Learning Research; vol. 244).Research output: Chapter in Book/Report/Conference proceeding › Conference article in proceedings › Scientific › peer-review
Open Access -
Bayesian reduced rank regression models generalizable neural fingerprints that differentiate between individuals in magnetoencephalography data
Haakana, J., Merz, S., Kaski, S., Renvall, H. & Salmelin, R., May 2024, In: European Journal of Neuroscience. 59, 9, p. 2320-2335 16 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile37 Downloads (Pure) -
Collaborative learning from distributed data with differentially private synthetic data
Prediger, L., Jälkö, J., Honkela, A. & Kaski, S., 14 Jun 2024, In: BMC Medical Informatics and Decision Making. 24, 1, p. 1-14 14 p., 167.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile1 Citation (Scopus)26 Downloads (Pure)
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AIM4REAL: AIM4REAL - Artificial Intelligence for Personalised Medicine for Real
Kaski, S. (Principal investigator), Loría Solorzano, J. (Project Member) & Mäkinen, L. (Project Member)
01/01/2024 → 31/12/2025
Project: Academy of Finland: Other research funding
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RAICU: Real-time AI-assistance with computationally rational user models
Kaski, S. (Principal investigator), Yeom Song, V. (Project Member) & Hokkanen, M. (Project Member)
01/01/2024 → 31/12/2026
Project: Academy of Finland: Other research funding
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PRIMUS: Secure Use of Data in Health
Kaski, S. (Principal investigator)
01/01/2024 → 31/12/2026
Project: Academy of Finland: Other research funding
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Veturi VL4Pharma Kaski S.: Virtual Laboratories for Pharmaceutical Research and Development
Kaski, S. (Principal investigator), Jain, A. (Project Member) & Masood, A. (Project Member)
01/09/2023 → 31/08/2025
Project: Business Finland: Other research funding
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CSC JPN-FIN Kaski S.: AI assistant for helping develop privacy-preserving versions of deep learning models
Kaski, S. (Principal investigator) & Yang, Y. (Project Member)
01/02/2023 → 30/09/2025
Project: Other external funding: Other government funding
Datasets
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Identification of multiplicatively acting modulatory mutational signatures in cancer
Kičiatovas, D. (Creator), Guo, Q. (Creator), Kailas, M. (Creator), Pesonen, H. (Creator), Corander, J. (Creator), Kaski, S. (Creator), Pitkänen, E. (Creator) & Mustonen, V. (Creator), figshare, 13 Apr 2023
DOI: 10.6084/m9.figshare.c.6579047, https://springernature.figshare.com/collections/Identification_of_multiplicatively_acting_modulatory_mutational_signatures_in_cancer/6579047
Dataset
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Human-in-the-loop assisted de novo molecular design
Sundin, I. (Creator), Voronov, A. (Creator), Xiao, H. (Creator), Papadopoulos, K. (Creator), Bjerrum, E. J. (Creator), Heinonen, M. (Creator), Patronov, A. (Creator), Kaski, S. (Creator) & Engkvist, O. (Creator), figshare, 13 Aug 2024
DOI: 10.6084/m9.figshare.c.6582620, https://springernature.figshare.com/collections/Human-in-the-loop_assisted_de_novo_molecular_design/6582620
Dataset
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Connectomes of phase-synchronization generated by Wilson-Cowan network model
Williams, N. (Contributor), Toselli, B. (Creator), Siebenhühner, F. (Contributor), Palva, S. (Creator), Arnulfo, G. (Creator), Kaski, S. (Contributor) & Palva, M. (Contributor), Mendeley Data, 6 Aug 2021
DOI: 10.17632/bgs7w9z24h.2, https://data.mendeley.com/datasets/bgs7w9z24h
Dataset
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Biological constraints for parameter values of large-scale biologically plausible human Neuroscience models
Williams, N. (Creator), Ojanperä, A. (Contributor), Siebenhühner, F. (Contributor), Toselli, B. (Contributor), Palva, S. (Contributor), Arnulfo, G. (Contributor), Kaski, S. (Contributor) & Palva, M. (Contributor), Mendeley Data, 2023
DOI: 10.17632/5kgw7ssbpx.1, https://data.mendeley.com/datasets/5kgw7ssbpx
Dataset
Prizes
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Aalto SCI Award 2018 for Innovation of the year
Kaski, S. (Recipient), 2018
Prize: Award or honor granted for a specific work
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Academy Professor
Kaski, S. (Recipient), 2016
Prize: Award or honor granted for academic or artistic career
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Member of Finnish Academy of Science and Letters
Kaski, S. (Recipient), 2017
Prize: Award or honor granted for academic or artistic career
Activities
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Examiner of a doctoral thesis
Kaski, S. (Examiner)
2024Activity: Academic assessments › Pre-examination of doctoral thesis or acting as opponent to doctoral students or membership of doctoral thesis committee or board
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External examiner of PhD thesis
Kaski, S. (Examiner)
2024Activity: Academic assessments › Pre-examination of doctoral thesis or acting as opponent to doctoral students or membership of doctoral thesis committee or board
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AI&UK - miten terveydenhuolto voi hyötyä tekoälytutkimuksesta
Kaski, S. (Speaker)
2024Activity: Talk or presentation types › Public talk to non-academic audience (public outreach)
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Tekoäly ja tulevaisuus
Kaski, S. (Speaker)
2024Activity: Talk or presentation types › Public talk to non-academic audience (public outreach)
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External examiner of PhD thesis
Kaski, S. (Examiner)
2024Activity: Academic assessments › Pre-examination of doctoral thesis or acting as opponent to doctoral students or membership of doctoral thesis committee or board
Press/Media
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Kyyninen toimittaja kysyy: Olemmeko oikeasti satojen päivien päästä paratiisissa?
24/11/2024
1 item of Media coverage
Press/Media: Media appearance
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Suomen ELLIS-instituutti vauhdittaa tekoälyosaamista
05/11/2024
1 item of Media coverage
Press/Media: Media appearance
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Researchers from Aalto University Detail Findings in Statistics and Computing (Likelihood-free Inference In State-space Models With Unknown Dynamics)
02/02/2024
1 item of Media coverage
Press/Media: Media appearance
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Suomi on vielä hyvissä asemissa tekoälykilvassa, arvioi professori Samuel Kaski
18/11/2023
1 item of Media coverage
Press/Media: Media appearance