Research Output per year
Personal profile
Education/Academic qualification
Doctor of Philosophy, Statistics
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Network
Recent external collaboration on country level. Dive into details by clicking on the dots.
Research Output
Batch simulations and uncertainty quantification in Gaussian process surrogate approximate Bayesian computation
Järvenpää, M., Vehtari, A. & Marttinen, P., 2020, (Accepted/In press) Conference on Uncertainty in Artificial Intelligence (UAI 2020).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
Parallel Gaussian process surrogate Bayesian inference with noisy likelihood evaluations
Järvenpää, M., Gutmann, M., Vehtari, A. & Marttinen, P., Feb 2020, (Accepted/In press) In : Bayesian Analysis.Research output: Contribution to journal › Article › Scientific › peer-review
Plasmids shaped the recent emergence of the major nosocomial pathogen Enterococcus faecium
Arredondo-Alonso, S., Top, J., McNally, A., Puranen, S., Pesonen, M., Pensar, J., Marttinen, P., Braat, J., Rogers, M., van Schaik, W., Kaski, S., Willems, R. J. L., Corander, J. & Schürch, A., 2020, In : MBIO. 11, 1, e03284-19.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
File
A Bayesian model of acquisition and clearance of bacterial colonization incorporating within-host variation
Järvenpää, M., Sater, M. R. A., Lagoudas, G. K., Blainey, P. C., Miller, L. G., McKinnell, J. A., Huang, S. S., Grad, Y. H. & Marttinen, P., 1 Apr 2019, In : PLoS computational biology. 15, 4, p. 1-25 e1006534.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
File
Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen
Kaski, S. & Marttinen, P., 17 Jun 2019, In : Nature Communications. 10, 1, p. 1-17 17 p., 2674.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
File
Projects
FCAI: Finnish Center for Artificial Intelligence (FCAI)
01/01/2019 → 31/12/2022
Project: Academy of Finland: Other research funding
FCAI: Finnish Center for Artificial Intelligence (FCAI)
01/01/2019 → 31/12/2022
Project: Academy of Finland: Other research funding
Computational models and methods for deciphering evolutionary patterns in bacterial genomic data
Järvenpää, M., Marttinen, P. & Väärä, T.
01/09/2018 → 31/08/2020
Project: Academy of Finland: Other research funding
eMOM: CleverHealth Network: eMOM GDM -Project
Alizadeh Ashrafi, R. & Marttinen, P.
05/02/2018 → 30/06/2021
Project: Business Finland: Other research funding
Computational models and methods for deciphering evolutionary patterns in bacterial genomic data
Marttinen, P., Kumar, Y. & Poyraz, O.
01/09/2015 → 31/08/2020
Project: Academy of Finland: Other research funding
Datasets
Data from: Single-cell genomics reveals hundreds of coexisting subpopulations in wild Prochlorococcus
Marttinen, P. (Creator), Stepanauskas, R. (Creator), SW, C. (Creator), Dryad Digital Repository, 25 Apr 2014
DOI: 10.5061/dryad.9r0p6, https://datadryad.org/resource/doi:10.5061/dryad.9r0p6 and 8 more links, https://doi.org/10.5061/dryad.9r0p6/1, https://doi.org/10.5061/dryad.9r0p6/2, https://doi.org/10.5061/dryad.9r0p6/3, https://doi.org/10.5061/dryad.9r0p6/4, https://doi.org/10.5061/dryad.9r0p6/5, https://doi.org/10.5061/dryad.9r0p6/6, https://doi.org/10.5061/dryad.9r0p6/7, https://doi.org/10.5061/dryad.9r0p6/8 (show fewer)
Dataset
Data from: Cryptic ecology among host generalist Campylobacter jejuni in domestic animals
Strachan, N. (Creator), Forbes, K. (Creator), Colles, F. (Creator), Jolley, K. (Creator), Bentley, S. (Creator), Maiden, M. (Creator), Hänninen, M. (Creator), Parkhill, J. (Creator), Hanage, W. (Creator), Corander, J. (Creator), Dryad Digital Repository, 28 Mar 2014
DOI: 10.5061/dryad.hk860, https://datadryad.org/resource/doi:10.5061/dryad.hk860 and 3 more links, https://doi.org/10.5061/dryad.hk860/1, https://doi.org/10.5061/dryad.hk860/2, https://doi.org/10.5061/dryad.hk860/3 (show fewer)
Dataset
Activities
Harvard School of Public Health
Pekka Marttinen (Visiting researcher)20 Aug 2018 → 24 Aug 2018
Activity: Visiting an external institution types › Visit abroad
Interactive elicitation of knowledge on feature relevance improves predictions in small data sets
Pekka Marttinen (Speaker)14 Mar 2017
Activity: Talk or presentation types › Conference presentation
Foreign Organisation
Pekka Marttinen (Visiting researcher)5 Jun 2016 → 24 Jun 2016
Activity: Visiting an external institution types › Visit abroad
Harvard University
Pekka Marttinen (Visiting researcher)2014
Activity: Visiting an external institution types › Visit abroad
Permafrost workshop on bacterial evolution, Bormio, 4.-9.2.2011, Italy
Pekka Marttinen (Speaker)2011
Activity: Talk or presentation types › Public or invited talk
Press / Media
Using A Deep Neural Network Model to Predict Elderly Care
23/12/2019
1 item of Media coverage
Press/Media: Media appearance
New algorithm identifies gene transfers between different bacterial species
19/12/2019
1 item of Media coverage
Press/Media: Media appearance
Terveyspalvelujen käyttöä ennustava neuroverkkomalli voi säästää miljoonia
16/12/2019
1 item of Media coverage
Press/Media: Media appearance
Neural Network For Elderly Care Could Save millions
14/12/2019 → 16/12/2019
3 items of Media coverage
Press/Media: Media appearance
Daily Health News Bulletin (16-12-19).
16/12/2019
1 item of Media coverage
Press/Media: Media appearance