Research output per year
Research output per year
Personal profile
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
Education/Academic qualification
Doctor of Philosophy in the natural sciences, University of Helsinki
Award Date: 22 Nov 2013
Doctoral degree, Natural Sciences, University of Helsinki
Award Date: 5 Nov 2013
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Computational Intelligence Methods for Bioinformatics and Biostatistics : 19th International Meeting, CIBB 2024, Benevento, Italy, September 4–6, 2024, Revised Selected Papers
Cerulo, L. (Editor), Napolitano, F. (Editor), Bardozzo, F. (Editor), Cheng, L. (Editor), Annalisa, A. (Editor) & Pagnotta, S. M. (Editor), 2025, Springer. 300 p. (Lecture Notes in Computer Science; vol. 15276)Research output: Book/Report › Anthology › Scientific › peer-review
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Driver gene detection via causal inference on single cell embeddings
Fu, C. & Cheng, L., 2025, Computational Intelligence Methods for Bioinformatics and Biostatistics : 19th International Meeting, CIBB 2024, Benevento, Italy, September 4–6, 2024, Revised Selected Papers. Springer, 6 p. (Lecture Notes in Computer Science; vol. 15276).Research output: Chapter in Book/Report/Conference proceeding › Conference article in proceedings › Scientific › peer-review
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NanoBaseLib: A Multi-Task Benchmark Dataset for Nanopore Sequencing
Cheng, G., Fu, C. & Cheng, L., 26 Sept 2024, (Accepted/In press) Advances in Neural Information Processing Systems (NeurIPS). (Conference on Neural Information Processing Systems (NeurIPS)).Research output: Chapter in Book/Report/Conference proceeding › Conference article in proceedings › Scientific › peer-review
Open AccessFile67 Downloads (Pure) -
Phthalate exposure and subfecundity in preconception couples : A nested case-control study
Yin, A., Mao, L., Zhang, C., Du, B., Xiong, X., Chen, A., Cheng, L., Zhang, Z., Li, X., Zhou, Y. & Jiang, H., 15 Jun 2024, In: Ecotoxicology and Environmental Safety. 278, p. 1-12 12 p., 116428.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile1 Citation (Scopus)18 Downloads (Pure) -
SCAPE-APA: a package for estimating alternative polyadenylation events from scRNA-seq data
Cheng, G., Le, T., Zhou, R. & Cheng, L., 16 Oct 2024, (E-pub ahead of print) In: Open Research Europe.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
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Cheng Lu AoF costs part2: Systematic approach to study alternative splicing from scRNA-seq in cancer
Cheng, L. (Principal investigator), Fu, C. (Project Member) & Cheng, G. (Project Member)
01/09/2023 → 31/08/2025
Project: Academy of Finland: Other research funding
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Single cell RNA sequencing analytical tools for studying cell differentiation
Raitio, R. (Principal investigator) & Cheng, L. (Project Member)
01/09/2020 → 31/08/2025
Project: Academy of Finland: Other research funding
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AoF Mobility 2021 Cheng: Association of oral microbiota and baby delivery in pregnant women cohort
Cheng, L. (Principal investigator)
01/03/2021 → 31/12/2022
Project: Academy of Finland: Other research funding
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-: Systematic approach to study alternative splicing from scRNA-seq in cancer
Cheng, L. (Principal investigator), Cheng, G. (Project Member), Huang, D. (Project Member), Fu, C. (Project Member) & Säilynoja, T. (Project Member)
01/09/2020 → 28/02/2024
Project: Academy of Finland: Other research funding
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P4 Diabetes: Personalised medicine to predict and prevent Type 1 Diabetes
Lähdesmäki, H. (Principal investigator), Cheng, L. (Project Member), Huang, D. (Project Member), Somani, J. (Project Member), Halla-aho, V. (Project Member), Jokinen, E. (Project Member), Tikhonov, G. (Project Member), Vatanen, T. (Project Member) & Mentu, S. (Project Member)
01/09/2015 → 31/08/2019
Project: Academy of Finland: Other research funding
Datasets
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Data from: Cryptic ecology among host generalist Campylobacter jejuni in domestic animals
Sheppard, S. K. (Contributor), Cheng, L. (Contributor), Méric, G. (Contributor), Haan, C. (Contributor), Llarena, A.-K. (Contributor), Marttinen, P. (Contributor), Vidal, A. (Contributor), Ridley, A. (Contributor), Clifton-Hadley, F. (Contributor), Connor, T. R. (Contributor), Strachan, N. (Creator), Forbes, K. (Creator), Colles, F. (Creator), Jolley, K. (Creator), Bentley, S. (Creator), Maiden, M. (Creator), Hänninen, M.-L. (Creator), Parkhill, J. (Creator), Hanage, W. P. (Creator) & Corander, J. (Creator), Dryad Digital Repository, 28 Mar 2014
DOI: 10.5061/dryad.hk860, https://datadryad.org/resource/doi:10.5061/dryad.hk860 and 3 more links, https://doi.org/10.5061/dryad.hk860/1, https://doi.org/10.5061/dryad.hk860/2, https://doi.org/10.5061/dryad.hk860/3 (show fewer)
Dataset
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NanoBaseLib: A Multi-Task Benchmark Dataset for Nanopore Sequencing
Cheng, G. (Creator), Fu, C. (Creator) & Cheng, L. (Creator), Zenodo, 17 Oct 2024
DOI: 10.5281/zenodo.10889895, https://zenodo.org/records/10889896
Dataset