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Personal profile

Education/Academic qualification

Doctor of Philosophy in Natural Sciences

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Research Output

  • 6 Article
  • 1 Conference contribution
  • 1 Meeting Abstract

An additive Gaussian process regression model for interpretable non-parametric analysis of longitudinal data

Cheng, L., Ramchandran, S., Vatanen, T., Lietzén, N., Lahesmaa, R., Vehtari, A. & Lähdesmäki, H., 17 Apr 2019, In : Nature Communications. 10, 1, p. 1-11 11 p., 1798.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File
  • 3 Citations (Scopus)
    139 Downloads (Pure)

    Characterization and non-parametric modeling of the developing serum proteome during infancy and early childhood

    Lietzén, N., Cheng, L., Moulder, R., Siljander, H., Laajala, E., Härkönen, T., Peet, A., Vehtari, A., Tillmann, V., Knip, M., Lähdesmäki, H. & Lahesmaa, R., 1 Dec 2018, In : Scientific Reports. 8, 1, p. 1-13 5883.

    Research output: Contribution to journalArticleScientificpeer-review

    Open Access
    File
  • 3 Citations (Scopus)
    135 Downloads (Pure)

    Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis

    Sieberts, S. K., Zhu, F., García-García, J., Stahl, E., Pratap, A., Pandey, G., Pappas, D., Aguilar, D., Anton, B., Bonet, J., Eksi, R., Fornés, O., Guney, E., Li, H., Marín, M. A., Panwar, B., Planas-Iglesias, J., Poglayen, D., Cui, J., Falcao, A. O. & 73 others, Suver, C., Hoff, B., Balagurusamy, V. S. K., Dillenberger, D., Neto, E. C., Norman, T., Aittokallio, T., Ammad-Ud-Din, M., Azencott, C. A., Bellón, V., Boeva, V., Bunte, K., Chheda, H., Cheng, L., Corander, J., Dumontier, M., Goldenberg, A., Gopalacharyulu, P., Hajiloo, M., Hidru, D., Jaiswal, A., Kaski, S., Khalfaoui, B., Khan, S. A., Kramer, E. R., Marttinen, P., Mezlini, A. M., Molparia, B., Pirinen, M., Saarela, J., Samwald, M., Stoven, V., Tang, H., Tang, J., Torkamani, A., Vert, J. P., Wang, B., Wang, T., Wennerberg, K., Wineinger, N. E., Xiao, G., Xie, Y., Yeung, R., Zhan, X., Zhao, C., Greenberg, J., Kremer, J., Michaud, K., Barton, A., Coenen, M., Mariette, X., Miceli, C., Shadick, N., Weinblatt, M., De Vries, N., Tak, P. P., Gerlag, D., Huizinga, T. W. J., Kurreeman, F., Allaart, C. F., Louis Bridges, S., Criswell, L., Moreland, L., Klareskog, L., Saevarsdottir, S., Padyukov, L., Gregersen, P. K., Friend, S., Plenge, R., Stolovitzky, G., Oliva, B., Guan, Y. & Mangravite, L. M., 23 Aug 2016, In : Nature Communications. 7, p. 1-9 12460.

    Research output: Contribution to journalArticleScientificpeer-review

    Open Access
    File
  • 42 Citations (Scopus)
    156 Downloads (Pure)

    Enterovirus-associated changes in plasma proteome of children with genetic susceptibility to type 1 diabetes

    Lietzen, N., Cheng, L., Oikarinen, S., Goo, Y. A., Goodlett, D., Toppari, J., Ilonen, J., Veijola, R., Knip, M., Lähdesmäki, H., Hyöty, H. & Lahesmaa, R., May 2016, In : SCANDINAVIAN JOURNAL OF IMMUNOLOGY. 83, 5, p. 381-381 1 p.

    Research output: Contribution to journalMeeting AbstractScientificpeer-review

    Random projection based clustering for population genomics

    Tasoulis, S., Cheng, L., Valimaki, N., Croucher, N. J., Harris, S. R., Hanage, W. P., Roos, T. & Corander, J., 7 Jan 2015, Proceedings - 2014 IEEE International Conference on Big Data, IEEE Big Data 2014. IEEE, p. 675-682 8 p. 7004291

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  • 8 Citations (Scopus)

    Projects

    Systematic approach to study alternative splicing from scRNA-seq in cancer

    Cheng, L.

    01/09/202031/08/2025

    Project: Academy of Finland: Other research funding

    Cheng Lu/AoF costs

    Cheng, L.

    01/09/202031/08/2023

    Project: Academy of Finland: Other research funding

    ELVI: Early diagnosis and prevention of autoimmune diseases – type 1 diabetes and celiac disease

    Lähdesmäki, H., Cheng, L. & Ramchandran, S.

    01/09/201531/12/2018

    Project: Business Finland: Other research funding

    Personalised medicine to predict and prevent Type 1 Diabetes

    Lähdesmäki, H., Somani, J., Cheng, L., Tikhonov, G., Jokinen, E., Halla-aho, V., Mentu, S. & Papatheodorou, D.

    01/09/201524/09/2019

    Project: Academy of Finland: Other research funding

    Datasets

    Data from: Cryptic ecology among host generalist Campylobacter jejuni in domestic animals

    Strachan, N. (Creator), Forbes, K. (Creator), Colles, F. (Creator), Jolley, K. (Creator), Bentley, S. (Creator), Maiden, M. (Creator), Hänninen, M. (Creator), Parkhill, J. (Creator), Hanage, W. (Creator), Corander, J. (Creator), Dryad Digital Repository, 28 Mar 2014

    Dataset

    Press / Media