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Jorma Tarhio

    20002019

    Research output per year

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    Research Output

    2000

    Boyer-Moore string matching over Ziv-Lempel compressed text

    Navarro, G. & Tarhio, J., 2000, CPM '00, 11th Annual Symposium on Combinatorial Pattern Matching, June 21-23, 2000, Montreal. Giancarlo, R. & Sankoff, D. (eds.). Berlin, p. 166-180

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    How a visualization tool can be used - Evaluating a tool in a research & development project

    Lattu, M., Meisalo, V. & Tarhio, J., 2000, PPIG '00, 12th Annual Meeting of the Psychology of Programming Interest Group, April 11-13, 2000, Calabro, Italy. Blackwell, A. & Bilotta, E. (eds.). Cosenza: PPIG, p. 19-32

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    Indexing text with approximate q-grams

    Navarro, G., Sutinen, E., Tanninen, J. & Tarhio, J., 2000, CPM '00, 11th Annual Symposium on Combinatorial Pattern Matching, June 21-23, 2000, Montreal. Giancarlo, R. & Sankoff, D. (eds.). Berlin, p. 350-363

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    20 Citations (Scopus)

    Modernit oppimisympäristöt - Tietotekniikan käyttö opetuksen ja oppimisen tukena

    Meisalo, V., Sutinen, E. & Tarhio, J., 2000, Helsinki: Tietosanoma. 341 p.

    Research output: Book/ReportBookScientificpeer-review

    Searching monophonic patterns within polyphonic sources

    Lemström, K. & Tarhio, J., 2000, RIAO '00, Conf. of Content-Based Multimedia Information Access, April 12-14, 2000, Paris. Paris: C.I.D., p. 1261-1279

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    2001

    Animation of flowcharts with Excel

    Eskola, J. & Tarhio, J., 2001, The First Program Visualization Workshop. Sutinen, E. (ed.). Joensuu: Joensuun yliopisto, p. 59-68

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    Design models for enhancing open learning environments

    Meisalo, V., Sutinen, E. & Tarhio, J., 2001, 9th International Conference on Computers in Education (ICCE/SchoolNet2001), Seoul, Korea, 12.-15.11.2001. Seoul, Korea, p. 520-523

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    Ikoniohjelmointia Excelillä

    Eskola, J. & Tarhio, J., 2001, In : Dimensio. 65, 6, p. 52-55

    Research output: Contribution to journalArticleScientificpeer-review

    Indexing methods for approximate string matching

    Navarro, G., Baeza-Yates, R., Sutinen, E. & Tarhio, J., 2001, In : Bulletin of the Technical Committee on Data Engineering. 24, 4, p. 19-27

    Research output: Contribution to journalArticleScientificpeer-review

    Infomediator based network for unifying E-commerce

    Eronen, P., Makkonen, J-P. & Tarhio, J., 2001, International Conference on Intelligent Agents, Web Technology and Internet Commerce, Las Vegas, 9.-11.7.2001. Las Vegas, USA, p. 285-291

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    On compression of parse trees

    Tarhio, J., 2001, 8th International Symposium on String Processing and Information Retrieval, Laguna San Rafel, Chile, 13.-15.11.2001,. Los Alamitos, California: IEEE Computer Society, p. 205-211

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    On using a visualization tool as a demonstration aid.

    Lattu, M., Meisalo, V. & Tarhio, J., 2001, The First Program Visualization Workshop, July 7-8, 2000, Porvoo. Sutinen, E. (ed.). Joensuu: Joensuun yliopisto, p. 141-162

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    Teaching to identify problems in a creative way

    Sutinen, E. & Tarhio, J., 2001, 31st ASEE/IEEEE Frontiers in Education Conference, Reno, Nevada, 10.-13.10.2001. Reno, Nevada, U.S.A.: IEEE, p. p. T1D8-13

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    Versatile concept map viewing on the Web

    Rautama, E., Karvonen, A., Tarhio, J. & Turkia, J., 2001, The 6th Annual Conference on Innovation and Technology in Computer Science Education, June 25-27, 2001, England. Finkel, D. (ed.). Canterbury: ACM/SIGCSE, p. 105-108

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    Web tools for creative problem solving

    Rautama, E., Sutinen, E. & Tarhio, J., 2001, 9th International Conference on Computers in Education (ICCE/SchoolNet2001), Seoul, Korea, 12.-15.11.2001. Seoul, Korea, p. 524-530

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    2002

    Concept gaming

    Eronen, P., Nuutinen, J., Rautama, E., Sutinen, E. & Tarhio, J., 2002, International Conference on Computers in Education (ICCE2002), December 3-6, 2002, Auckland, New Zealand. et al., K. (ed.). Los Alamitos, California: IEEE Computer Society, p. 997-1001

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    2 Citations (Scopus)

    On visualization of recursion with Excel

    Eskola, J. & Tarhio, J., 2002, Second Program Visualization Workshop, June 27-28, HornstrupCentret, Denmark. Ben-Ari, M. (ed.). Aarhus: University of Aarhus, Dept. of Computer Science, p. 45-51

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    Perspectives on program animation with Jeliot

    Ben-Ari, M., Myller, N., Sutinen, E. & Tarhio, J., 2002, Software Visualization. International Seminar, Dagstuhl Castle, Germany, May 20-25, 2001. Diehl, S. (ed.). Berlin, p. 31-45

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    String matching with stopper compression

    Rautio, J., Tanninen, J. & Tarhio, J., 2002, Los Alamitos, CA, USA, p. 469, (Data Compression Conference, April 2-4, 2002, Snowbird, USA).

    Research output: Working paperProfessional

    String matching with stopper encoding and code splitting.

    Rautio, J., Tanninen, J. & Tarhio, J., 2002, Combinatorial Pattern Matching, 13th Annual Symposium, July 3-5, 2002, Fukuoka, Japan. Apostolico, A. & Takeda, M. (eds.). Berlin, p. 42-52

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    18 Citations (Scopus)

    Understanding Algorithms by Means of Visualized Path Testing

    Korhonen, A., Sutinen, E. & Tarhio, J., 2002, Software Visualization.International Seminar, Dagstuhl Castle, Germany, May 20-25, 2001.Revised Papers. Diehl, S. (ed.). Germany, p. 256-268

    Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

    2 Citations (Scopus)
    2003

    Alternative Algorithms for Bit-Parallel String Matching

    Peltola, H. & Tarhio, J., 2003, String Processing and Information Retrieval, 10th International Symposium, SPIRE 2003; October 8-10, 2003; Manaus, Brazil. Nascimento, M., Moura E. S., D. & Oliveira, A. L. (eds.). Heidelberg, p. 80-94

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    49 Citations (Scopus)

    A visualization tool as a demonstration aid

    Lattu, M., Meisalo, V. & Tarhio, J., 2003, In : Computers & Education. 41, 2, p. 107-204

    Research output: Contribution to journalArticleScientificpeer-review

    12 Citations (Scopus)

    Easy algorithm animation on the Web

    Sutinen, E., Tarhio, J. & Teräsvirta, T., 2003, In : Multimedia Tools and Applications. 19, 2, p. 179-194

    Research output: Contribution to journalArticleScientificpeer-review

    11 Citations (Scopus)

    Modernit oppimisympäristöt - Tieto- ja viestintätekniikka opetuksen ja oppimisen tukena

    Meisalo, V., Sutinen, E. & Tarhio, J., 2003, Helsinki: Tietosanoma. 400 p.

    Research output: Book/ReportBookScientificpeer-review

    Processing of Huffman Compressed Texts with a Super-Alphabet

    Fredriksson, K. & Tarhio, J., 2003, String Processing and Information Retrieval, 10th International Symposium, SPIRE 2003; October 8-10, 2003; Manaus, Brazil. Nascimento, M., Moura E. S., D. & Oliveira, A. L. (eds.). Heidelberg, p. 108-121

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    2 Citations (Scopus)

    Tietojenkäsittelytieteen päivät 2003

    Korhonen, A. & Tarhio, J., 2003, Espoo: Tietojenkäsittelytieteen Seura r.y. 69 p.

    Research output: Book/ReportAnthologyScientificpeer-review

    Transposition invariant pattern matching for multi-track strings

    Lemström, K. & Tarhio, J., 2003, In : Nordic Journal of Computing. 10, 3, p. 185-205

    Research output: Contribution to journalArticleScientificpeer-review

    Tuning string matching for huge pattern sets

    Kytöjoki, J., Salmela, L. & Tarhio, J., 2003, Combinatorial Pattern Matching, 14th Annual Symposium, June 25-27, 2003, Morelia, Mexico. Baeza-Yates, R., Chavez, E. & Crochemore, M. (eds.). Berlin, p. 211-224

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    9 Citations (Scopus)
    2004

    ACE: Automated Compiler Exercises

    Salmela, L. & Tarhio, J., 2004, Kolin Kolistelut-Koli Calling 2004. Fourth Finnish/Baltic Sea Conference on Computer Science Education, Koli, Finland, October 1-3,2004. Korhonen, A. & Malmi, L. (eds.). Espoo: Helsinki University of Technology, Department of Computer Science and Engineering, Laboratory of Information Processing Science, p. 131-135

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    Approximate string matching with ordered q-grams

    Sutinen, E. & Tarhio, J., 2004, In : Nordic Journal of Computing. 11, 4, p. 321-343

    Research output: Contribution to journalArticleScientificpeer-review

    Efficient string matching in Huffman compressed texts

    Fredriksson, K. & Tarhio, J., 2004, In : Fundamenta Informaticae. 62, 1, p. 1-16

    Research output: Contribution to journalArticleScientificpeer-review

    3 Citations (Scopus)

    Mobile collaborative concept mapping - Combining classroom activity with simultaneous field exploration

    Silander, P., Sutinen, E. & Tarhio, J., 2004, 2nd IEEE International Workshop on Wireless and Mobile Technologies in Education, March 23-25, 2004, Jhongli, Taiwan. Los Alamitos: IEEE Computer Society, p. 114-118

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    16 Citations (Scopus)

    The Possibilities of Information Retrieval in Education

    Meisalo, V., Sutinen, E. & Tarhio, J., 2004, Proceedings of the XXI annual symposium of tthe Finnish Association of Mathematics and Science Education Research. Laine, A., Lavonen, J. & Meisalo, V. (eds.). Helsinki: University of Helsinki, Department of Applied Sciences of Education, p. 528-549

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    2005

    Computer aided concept mapping for constructing shared cognitive representations and conceptual artifacts

    Silander, P., Sutinen, E. & Tarhio, J., 2005, ADIS International Conference Cognition and Exploratory Learning in Digital Age (CELDA 2005), Dec. 14-16 2005, Porto, Portugal. Isaias, P. & Sampson, D. G. (eds.). p. 3-8

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    Indexing text with approximate q-grams

    Navarro, G., Sutinen, E. & Tarhio, J., 2005, In : Journal of Discrete Algorithms. 3, 2-4, p. 157-175

    Research output: Contribution to journalArticleScientificpeer-review

    20 Citations (Scopus)

    LZgrep: a Boyer-Moore string matching tool for Ziv-Lempel compressed text

    Navarro, G. & Tarhio, J., 2005, In : Software: Practice and Experience. 35, 12, p. 1107-1130

    Research output: Contribution to journalArticleScientificpeer-review

    22 Citations (Scopus)
    2006

    Ajatuksia konferenssiartikkeleista

    Tarhio, J., 2006, In : Tietojenkäsittelytiede. 25, p. 8-9

    Research output: Contribution to journalArticleProfessional

    Multi-Pattern String Matching with q-Grams

    Salmela, L., Tarhio, J. & Kytöjoki, J., 2006, In : ACM Journal of Experimental Algorithmics. 11, p. 1-19

    Research output: Contribution to journalArticleScientificpeer-review

    54 Citations (Scopus)

    Sublinear algorithms for parameterized matching

    Salmela, L. & Tarhio, J., 2006, Combinatorial Pattern Matching, Barcelona, Spain, July 2006. Lewenstein, M. & Valiente, G. (eds.). Germany, p. p. 354-364

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    4 Citations (Scopus)
    2007

    A framework for research on technology-enhanced special education

    Jormanainen, I., Kärnä-Lin, E., Lahti, L., Pihlainen-Bednarik, K., Sutinen, E., Tarhio, J. & Virnes, M., 2007, p. 54-55, (7th IEEE International Conference on Advanced Learning Technologies, ICALT 2007, July 18-20 2007, Niigata, Japan).

    Research output: Working paperProfessional

    Algorithms for Weighted Matching

    Salmela, L. & Tarhio, J., 2007, String Processing and Information Retrieval, Santiago, Chile, October 2007. Ziviani, N. & Baeza-Yates, R. (eds.). Germany, p. 276-286

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    6 Citations (Scopus)

    On String Matching in Chunked Texts

    Peltola, H. & Tarhio, J., 2007, Implementation and Application of Automata, 12th International Conference, CIAA 2007; July 16-18, 2007; Prague, Czech Republic. Holub, J. & Zdárek, J. (eds.). Heidelberg, p. 157-167

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    1 Citation (Scopus)

    Platform for Elaboration of Search Results

    Korhonen, A., Litola, J. & Tarhio, J., 2007, Web Information Systems and Technologies, March 3-6, Barcelona, Spain. Joaquim Filipe, J. C. (ed.). Portugal, p. 263-269

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    1 Citation (Scopus)

    Transcriptome annotation using tandem SAGE tags

    Rivals, E., Boureux, A., Lejeune, M., Ottones, F., Pérez, O., Tarhio, J., Pierrat, F., Ruffle, F., Commes, T. & Marti, J., 2007, In : Nucleic Acids Research. 35, 17, p. e108

    Research output: Contribution to journalArticleScientificpeer-review

    5 Citations (Scopus)

    Tuning Approximate Boyer-Moore for Gene Sequences

    Kalsi, P., Salmela, L. & Tarhio, J., 2007, String Processing and Information Retrieval, Santiago, Chile, October 2007. Ziviani, N. & Baeza-Yates, R. (eds.). Germany, p. 173-183

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    2008

    Exact string matching algorithms for biological sequences

    Kalsi, P., Peltola, H. & Tarhio, J., 2008, BIRD'08, 2nd International Conference on Bioinformatics Research and Development / ALBIO'08, Workshop on Algorithms in Molecular Biology; July 7-9, 2008; Vienna, Austria. Mourad Elloumi, J. K., Michal Linial, R. F. M. & Kristan Schneider, C. T. (eds.). Berlin, p. pages 417-426

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    Fast parameterized matching with q-grams

    Salmela, L. & Tarhio, J., 2008, In : Journal of Discrete Algorithms. 6, 3, p. 408-419

    Research output: Contribution to journalArticleScientificpeer-review

    12 Citations (Scopus)

    Semi-automated map generation for concept gaming

    Lahti, L. & Tarhio, J., 2008, IADIS International Conference Gaming 2008 (part of MCCSIS 2008): Design for Engaging Experience and Social Interaction, 25-27 July 2008, Amsterdam, the Netherlands. Xiao, Y. & ten Thij, E. (eds.). p. 36-43

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    Speeding up pattern matching by text sampling

    Claude, F., Navarro, G., Peltola, H., Salmela, L. & Tarhio, J., 2008, SPIRE 2008, 15th International Symposium on String Processing and Information Retrieval, Melbourne, Australia, November 10-12. Amir, A., Turpin, A. & Moffat, A. (eds.). Berlin, Germany, p. 87-98

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

    2 Citations (Scopus)