Research output per year
Research output per year
Personal profile
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
External positions
Director, Kyoto University, Institute for Chemical Research, Bioinformatics Center
1 Apr 2011 → 31 Mar 2013
Professor, Graduate School of Pharmaceutical Sciences, Kyoto University
1 Apr 2006 → …
Professor, Kyoto University, Institute for Chemical Research, Bioinformatics Center
1 Apr 2005 → …
Keywords
- Semi-supervised learning
- Machine learning
- Data mining
- Tensor factorization
- Graph mining
- Semi-structured data
- Data analysis
- Bioinformatics
- Systems biology
- Precision medicine
- Information retrieval
- Innovation in manufacturing
- Business analytics
Fingerprint
Dive into the research topics where Hiroshi Mamitsuka is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
- 1 Similar Profiles
Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Machine learning for predicting drug–drug interactions : Graph neural networks and beyond
Petschner, P., Nguyen, A. D., Nguyen, C. H. & Mamitsuka, H., Dec 2025, In: Current Opinion in Systems Biology. 42, p. 1-12 12 p., 100551.Research output: Contribution to journal › Review Article › peer-review
Open AccessFile2 Citations (Scopus)31 Downloads (Pure) -
Central-Smoothing Hypergraph Neural Networks for Predicting Drug-Drug Interactions
Nguyen, D. A., Nguyen, C. H. & Mamitsuka, H., 3 Apr 2024, In: IEEE Transactions on Neural Networks and Learning Systems . 35, 8, p. 11620-11625 6 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access16 Citations (Scopus) -
GORetriever : Reranking protein-description-based GO candidates by literature-driven deep information retrieval for protein function annotation
Yan, H., Wang, S., Liu, H., Mamitsuka, H. & Zhu, S., 1 Sept 2024, In: Bioinformatics. 40, p. ii53-ii61Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile6 Citations (Scopus)53 Downloads (Pure) -
DeepMHCI : an anchor position-aware deep interaction model for accurate MHC-I peptide binding affinity prediction
Qu, W., You, R., Mamitsuka, H. & Zhu, S., 2 Sept 2023, In: Bioinformatics. 39, 9, p. 1-10 10 p., btad551.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile11 Citations (Scopus)85 Downloads (Pure) -
Machine-learning based drug-drug interaction prediction identifies acetylsalicylic acid as risk for cardiovascular events during migraine treatment
Gecse, K., Nguyen, D. A., Juhasz, G., Mamitsuka, H. & Petschner, P., Sept 2023, In: Cephalalgia. 43, Suppl. 1, p. 76-76 1 p.Research output: Contribution to journal › Meeting Abstract › Scientific › peer-review
Projects
- 2 Finished
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-: Intelligent Crop Production: Data-integrative, Multi-task Learning Meets Crop Simulator
Mamitsuka, H. (Principal investigator), Hiremath, S. (Project Member), Honkamaa, J. (Project Member), Pöllänen, A. (Project Member), Güvenç Paltun, B. (Project Member), Nariman Zadeh, H. (Project Member), Ji, S. (Project Member), Ojala, F. (Project Member), Proll, M. (Project Member), Strahl, J. (Project Member) & Rissanen, S. (Project Member)
01/01/2018 → 31/12/2022
Project: Academy of Finland: Other research funding
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FiDiPro - Machine Learning for Augmented Science and Knowledge Work
Kaski, S. (Principal investigator), Rezaeiyousefi, Z. (Project Member), Gillberg, L. (Project Member), Kaplan, S. (Project Member), Gisbrecht, A. (Project Member), Güvenç Paltun, B. (Project Member), Mamitsuka, H. (Project Member), Strahl, J. (Project Member), Peltonen, J. (Project Member) & Eranti, P. (Project Member)
01/01/2015 → 31/12/2018
Project: Business Finland: Other research funding
Prizes
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Best Student Paper
Mamitsuka, H. (Recipient), 5 Dec 2018
Prize: Award or honor granted for a specific work
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IEEE Kansai Section Medal recipient
Mamitsuka, H. (Recipient), Feb 2014
Prize: Award or honor granted for academic or artistic career
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Recipient of 'Certificate of Appreciation', Service Award, IEEE Computer Society
Mamitsuka, H. (Recipient), 2009
Prize: Award or honor granted for academic or artistic career
Activities
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Similarly-based Machine Learning Approaches for Predicting Drug-target Interactions
Mamitsuka, H. (Speaker)
16 Mar 2018Activity: Talk or presentation types › Invited academic talk
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Data Integrative Machine Learning for Bioinformatics
Mamitsuka, H. (Speaker)
21 Jun 2018Activity: Talk or presentation types › Invited academic talk
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Graph-based Machine Learning
Mamitsuka, H. (Speaker)
16 Nov 2018Activity: Talk or presentation types › Invited academic talk
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16th International Conference on Bioinformatics
Mamitsuka, H. (Member)
20 Sept 2017 → 22 Sept 2017Activity: Participating in or organising an event types › Membership of a scientific or program committee of a conference or seminar
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Systems Medicine (Journal)
Mamitsuka, H. (Editor)
1 Oct 2017 → …Activity: Publication peer-review and editorial work types › Membership of an editorial board
Press/Media
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New Information Technology Findings Has Been Reported by Investigators at Kyoto University (Copoldb: a Copolymerization Database for Radical Polymerization)
05/03/2024
1 item of Media coverage
Press/Media: Media appearance