Heikki Mannila

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  • Aalto SCI Computer Science Konemiehentie 2

20012016

Research output per year

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Research Output

2016

Significance testing of word frequencies in corpora

Lijffijt, J., Nevalainen, T., Säily, T., Papapetrou, P., Puolamäki, K. & Mannila, H., 1 Jun 2016, In : Digital Scholarship in the Humanities. 31, 2, p. 374-397 24 p.

Research output: Contribution to journalArticleScientificpeer-review

21 Citations (Scopus)
2015

On the Applicability of Latent Variable Modeling to Research System Data

Bingham, E. & Mannila, H., 2015, Advances in Independent Component Analysis and Learning Machines. Bingham, E., Kaski, S., Laaksonen, J. & Lampinen, J. (eds.). Academic Press: Elsevier, p. 279-288

Research output: Chapter in Book/Report/Conference proceedingChapterScientific

2014

Towards computational techniques for identifying candidate chronofauna

Bingham, E. & Mannila, H., 2014, In : Annales Zoologici Fennici. 51, 1-2, p. 43-49

Research output: Contribution to journalArticleScientificpeer-review

1 Citation (Scopus)
2013

Quantifying variation and estimating the effects of sample size on the frequencies of linguistic variables

Mannila, H., Nevalainen, T. & Raumolin-Brunberg, H., 1 Jan 2013, Research Methods in Language Variation and Change. Cambridge University Press, p. 337-360 24 p.

Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

2 Citations (Scopus)
2012

Convergence in the distribution patterns of Europe's plants and mammals is due to environmental forcing

Heikinheimo, H., Eronen, J. T., Sennikov, A., Preston, C. D., Oikarinen, E., Uotila, P., Mannila, H. & Fortelius, M., 2012, In : Journal of Biogeography. 39, 9, p. 1633-1644

Research output: Contribution to journalArticleScientificpeer-review

14 Citations (Scopus)

Early environment and neurobehavioral development predict adult temperament clusters

Congdon, E., Service, S., Wessman, J., Seppänen, J. K., Schönauer, S., Miettunen, J., Turunen, H., Koiranen, M., Joukamaa, M., Järvelin, M-R., Peltonen, L., Veijola, J., Mannila, H., Paunio, T. & Freimer, N. B., 18 Jul 2012, In : PloS one. 7, 7, p. 1-9 e38065.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File
4 Citations (Scopus)
110 Downloads (Pure)

Temperament clusters in a normal population: Implications for health and disease

Wessman, J., Schönauer, S., Miettunen, J., Turunen, H., Parviainen, P., Seppänen, J. K., Congdon, E., Service, S., Koiranen, M., Ekelund, J., Laitinen, J., Taanila, A., Tammelin, T., Hintsanen, M., Pulkki-Råback, L., Keltikangas-Järvinen, L., Viikari, J., Raitakari, O. T., Joukamaa, M., Järvelin, M-R. & 5 others, Freimer, N., Peltonen, L., Veijola, J., Mannila, H. & Paunio, T., 18 Jul 2012, In : PloS one. 7, 7, p. 1-11 e33088.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File
7 Citations (Scopus)
64 Downloads (Pure)
2011

Analyzing Word Frequencies in Large Text Corpora using Inter-arrival Times and Bootstrapping

Lijffijt, J., Papapetrou, P., Puolamäki, K. & Mannila, H., 2011, ECML PKDD The European conference of Machine learning and knowledge discovery in databases - Part II (ECML PKDD 2011) ECML PKDD. Berlin, p. 341-357

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

10 Citations (Scopus)

A Shapley-value Approach for Influence Attribution

Papapetrou, P., Gionis, A. & Mannila, H., 2011, The European Conference of Machine Learning and Principles and Practices of Knowledge Discovery in Databases (ECML PKDD). ACM

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

10 Citations (Scopus)

Banded structure in binary matrices

Garriga, G. C., Junttila, E. & Mannila, H., 2011, In : Knowledge and Information Systems. 28, 1, p. 197-226

Research output: Contribution to journalArticleScientificpeer-review

19 Citations (Scopus)

Correlations and Co-Occurrences of Taxa: the Role of Temporal, Geographic and Taxonomic Restrictions

Kallio, A., Puolamäki, K., Fortelius, M. & Mannila, H., 2011, In : Palaeontologia Electronica. 14, 1

Research output: Contribution to journalArticleScientificpeer-review

5 Citations (Scopus)

Discovery Science - Proceedings of the 14th International Conference (DS 2011)

Elomaa, T., Hollmen, J. & Mannila, H., 2011, Espoo.

Research output: Book/ReportAnthologyScientificpeer-review

Randomization techniques for assessing the significance of gene periodicity results

Kallio, A., Vuokko, N., Ojala, M., Haiminen, N. & Mannila, H., 2011, In : BMC Bioinformatics. 12, 330

Research output: Contribution to journalArticleScientificpeer-review

7 Citations (Scopus)

The diffusion of language change in real time: Progressive and conservative individuals and the time depth of change

Nevalainen, T., Raumolin-Brunberg, H. & Mannila, H., Mar 2011, In : Language Variation and Change. 23, 1, p. 1-43 43 p.

Research output: Contribution to journalArticleScientificpeer-review

36 Citations (Scopus)

The effect of scale, climate and environment on species richness and spatial distribution of Finnish birds

Eronen, J. T., Puolamäki, K., Heikinheimo, H., Lokki, H., Venäläinen, A., Mannila, H. & Fortelius, M., 2011, In : Annales Zoologici Fennici. 48, 5, p. 257-274

Research output: Contribution to journalArticleScientificpeer-review

3 Citations (Scopus)
2010

Algorithms and Applications: Essays Dedicated to Esko Ukkonen on the Occasion of His 60th Birthday

Elomaa, T., Mannila, H. & Orponen, P., 2010, Berlin.

Research output: Book/ReportAnthologyScientificpeer-review

A theory of inductive query answering

De Raedt, L., Jaeger, M., Dan Lee, S. & Mannila, H., 2010, Inductive Databases and Constraint-Based Data Mining. Springer New York, p. 79-103 25 p.

Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

2 Citations (Scopus)

Autumn temperature and carbon balance of a boreal Scots pine forest in Southern Finland

Vesala, T., Launiainen, S., Kolari, P., Pumpanen, J., Sevanto, S., Hari, P., Nikinmaa, E., Kaski, P., Mannila, H., Ukkonen, E., Piao, S. & Ciais, P., 2010, In : BIOGEOSCIENCES. 7, 1, p. 163-176

Research output: Contribution to journalArticleScientificpeer-review

49 Citations (Scopus)

Evaluating Query Result Significance in Databases via Randomizations

Ojala, M., Garriga, G., Gionis, A. & Mannila, H., 2010, SDM The 2010 SIAM International Conference on Data Mining (SDM '10) SDM. p. 906-917

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

8 Citations (Scopus)

Evaluation of BIC and Cross Validation for model selection on sequence segmentations

Haiminen, N. & Mannila, H., 2010, In : INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS. 4, 6, p. 675-700 26 p.

Research output: Contribution to journalArticleScientificpeer-review

Gaussian Clusters and Noise: An Approach Based on the Minimum Description Length Principle

Luosto, P., Kivinen, J. & Mannila, H., 2010, Discovery Science 2010. p. 251-256

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

1 Citation (Scopus)

Linkage disequilibrium between chromosomes in the human genome: Test statistics and rapid computation

Bingham, E., Koivisto, M., Leino, Y. & Mannila, H., 2010, Helsinki.

Research output: Working paperProfessional

The living and the fossilized: How well do unevenly distributed points capture the faunal information in a grid?

Saarinen, J., Oikarinen, E., Fortelius, M. & Mannila, H., Mar 2010, In : EVOLUTIONARY ECOLOGY RESEARCH. 12, 3, p. 363-376 14 p.

Research output: Contribution to journalArticleScientificpeer-review

5 Citations (Scopus)
2009

Applying electromagnetic field theory concepts to clustering with constraints

Hakkoymaz, H., Chatzimilioudis, G., Gunopulos, D. & Mannila, H., 2009, ECML/PKDD, Bled, Slovenia, Sept. 7-11, 2009. p. 485500

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

1 Citation (Scopus)

Approximating the minimum chain completion problem

Feder, T., Mannila, H. & Terzi, E., 2009, In : Information Processing Letters. 109, 17, p. 980985

Research output: Contribution to journalArticleScientificpeer-review

A Randomized Approximation Algorithm for Computing Bucket Orders

Ukkonen, A., Puolamäki, K., Gionis, A. & Mannila, H., 2009, In : Information Processing Letters. 109, 7, p. 356-359

Research output: Contribution to journalArticleScientificpeer-review

13 Citations (Scopus)

Clusterings should not be compared by visual inspection: response to GagnE & Proulx

Heikinheimo, H., Fortelius, M., Eronen, J. & Mannila, H., 2009, In : Journal of Biogeography. 36, 3, p. 563-565

Research output: Contribution to journalArticleScientificpeer-review

Complexity control in a mixture model by the Hardy-Weinberg equilibrium

Bingham, E. & Mannila, H., 2009, In : Computational Statistics and Data Analysis. 53, 5, p. 1711-1719

Research output: Contribution to journalArticleScientificpeer-review

File
2 Citations (Scopus)
55 Downloads (Pure)

Determining attributes to maximize visibility of objects

Miah, M., Das, G., Hristidis, V. & Mannila, H., 2009, In : IEEE Transactions on Knowledge and Data Engineering. 21, 7, p. 959973

Research output: Contribution to journalArticleScientificpeer-review

8 Citations (Scopus)

Finding links and initiators: A graph-reconstruction problem

Mannila, H. & Terzi, E., 2009, SDM 2009, Sparks, Nevada, USA, Apr. 30 - May 2, 2009. p. 12071217

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

5 Citations (Scopus)

Low-entropy set selection

Heikinheimo, H., Vreeken, J., Siebes, A. & Mannila, H., 2009, SDM 2009, Sparks, Nevada, USA, Apr. 30 - May 2, 2009. p. 569580

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

6 Citations (Scopus)

Lower Extinction Risk in Sleep-or-Hide Mammals

Liow, L. H., Fortelius, M., Lintulaakso, K., Mannila, H. & Stenseth, N. C., 2009, In : American naturalist. 173, 2, p. 264-272

Research output: Contribution to journalArticleScientificpeer-review

Mixture Model Clustering of Phenotype Features Reveals Evidence for Association of DTNBP1 to a Specific Subtype of Schizophrenia

Wessman, J., Paunio, T., Tuulio-Henriksson, A., Koivisto, M., Partonen, T., Suvisaari, J., Turunen, J. A., Wedenoja, J., Hennah, W., Pietilainen, O. P. H., Lonnqvist, J., Mannila, H. & Peltonen, L., 2009, In : Biological Psychiatry. 66, 11, p. 990-996

Research output: Contribution to journalArticleScientificpeer-review

Randomization Methods for Assessing Data Analysis Results on Real-Valued Matrices

Ojala, M., Vuokko, N., Kallio, A., Haiminen, N. & Mannila, H., 2009, In : Statistical Analysis and Data Mining. 2, 4, p. 209-230

Research output: Contribution to journalArticleScientificpeer-review

19 Citations (Scopus)

Tell Me Something I Don't Know: Randomization Strategies for Iterative Data Mining

Hanhijärvi, S., Ojala, M., Vuokko, N., Puolamäki, K., Tatti, N. & Mannila, H., 2009, The 15th ACM SIGKDD Conference on Knowledge Discovery and Data Mining (KDD09). p. 379-388

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

52 Citations (Scopus)
2008

Banded structure in binary matrices

Garriga, G., Junttila, E. & Mannila, H., 2008, The 14th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining (KDD-2008), Las Vegas, Nevada, USA, Aug. 24-27, 2008. p. 292-300

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

12 Citations (Scopus)

Determining significance of pairwise co-occurrences of events in bursty sequences

Haiminen, N., Mannila, H. & Terzi, E., 2008, In : BMC Bioinformatics. 9, 336

Research output: Contribution to journalArticleScientificpeer-review

12 Citations (Scopus)

Evaluation of HapMap data in six populations of European descent

Lundmark, P. E., Liljedahl, U., Boomsma, D. I., Mannila, H., Martin, N. G., Palotie, A., Peltonen, L., Perola, M., Spector, T. D. & Syvanen, A-C., 2008, In : European journal of human genetics. p. 1-9

Research output: Contribution to journalArticleScientificpeer-review

Feature Selection in Taxonomies with Applications to Paleontology

Garriga, G. C., Ukkonen, A. & Mannila, H., 2008, Discovery Science, 11th International Conference, DS 2008, Budapest, Hungary, October 13-16, 2008. p. 112-123

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

6 Citations (Scopus)

Finding duplicate descriptors: algorithms for redescription mining

Miettinen, P., Gallo, A. & Mannila, H., 2008, SIAM Data Mining Conference 2008. p. 334-345

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Finding Total and Partial Orders from Data for Seriation

Mannila, H., 2008, Discovery Science. p. 16-25

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

8 Citations (Scopus)

Higher origination and extinction rates in larger mammals

Liow, L. H., Fortelius, M., Bingham, E., Lintulaakso, K., Mannila, H., Flynn, L. & Stenseth, N. C., 2008, In : Proceedings of the National Academy of Sciences of the United States of America. 105, 16, p. 6097-6102

Research output: Contribution to journalArticleScientificpeer-review

File
102 Citations (Scopus)
16 Downloads (Pure)

Macadamia: Master's Programme in Machine Learning and Data Mining

Raiko, T., Puolamäki, K., Karhunen, J., Hollmén, J., Honkela, A., Kaski, S., Mannila, H., Oja, E. & Simula, O., 2008, Teaching Machine Learning - Workshop on Open Problems and New Directions. Jacquemont, S. & Higuera, C. D. L. (eds.). Saint-'Etienne

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Mining Association Rules of Simple Conjunctive Queries

Goethals, B., Page, W. L. & Mannila, H., 2008, SIAM Data Mining Conference 2008. p. 96-107

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

19 Citations (Scopus)

Optimal segmentation using tree models

Gwadera, R., Gionis, A. & Mannila, H., 2008, In : Knowledge and Information Systems. 15, 3

Research output: Contribution to journalArticleScientificpeer-review

5 Citations (Scopus)

Phasing genotypes using a hidden Markov model

Rastas, P., Koivisto, M., Mannila, H. & Ukkonen, E., 2008, Bioinformatics Algorithms: Techniques and Applications. New York: Wiley, p. 373-391

Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

Randomization of real-valued matrices for assessing the significance of data mining results

Ojala, M., Vuokko, N., Kallio, A., Haiminen, N. & Mannila, H., 2008, SIAM Data Mining Conference 2008. p. 494-505

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

14 Citations (Scopus)

Reply to Vilar et al.: Sleep or hide, better for survival anytime

Liow, L. H., Fortelius, M., Bingham, E., Lintulaakso, K., Mannila, H., Flynn, L. & Stenseth, N. C., 2008, In : Proceedings of the National Academy of Sciences of the United States of America. p. E57

Research output: Contribution to journalArticleScientificpeer-review

Open Access
4 Citations (Scopus)

Standing Out in a Crowd: Selecting Attributes for Maximum Visibility

Miah, M., Hristidis, V., Das, G. & Mannila, H., 2008, International Conference on Data Engineering (ICDE 2008). p. 356-365

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

43 Citations (Scopus)

The Discrete Basis Problem

Miettinen, P., Mielikainen, T., Gionis, A., Das, G. & Mannila, H., 2008, In : IEEE Transactions on Knowledge and Data Engineering. 20, 10, p. 1348-1362

Research output: Contribution to journalArticleScientificpeer-review