20082020

Research output per year

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Personal profile

Keywords

  • Bioinformatics
  • Computational systems biology
  • Machine learning
  • Probabilistic modelling
  • Data mining

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Research Output

A personalised approach for identifying disease-relevant pathways in heterogeneous diseases

Somani, J., Ramchandran, S. & Lähdesmäki, H., 1 Dec 2020, In : npj Systems Biology and Applications. 6, 1, 17.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File
  • 1 Downloads (Pure)

    Enhancer prediction in the human genome by probabilistic modelling of the chromatin feature patterns

    Osmala, M. & Lähdesmäki, H., 20 Jul 2020, In : BMC Bioinformatics. 21, 1, 37 p.

    Research output: Contribution to journalArticleScientificpeer-review

    Open Access
    File
  • 2 Downloads (Pure)

    A Mathematical Model for Enhancer Activation Kinetics During Cell Differentiation

    Nousiainen, K., Intosalmi, J. & Lähdesmäki, H., 1 Jan 2019, Algorithms for Computational Biology - 6th International Conference, AlCoB 2019, Proceedings. Vega-Rodríguez, M. A., Holmes, I. & Martín-Vide, C. (eds.). p. 191-202 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11488 LNBI).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  • An additive Gaussian process regression model for interpretable non-parametric analysis of longitudinal data

    Cheng, L., Ramchandran, S., Vatanen, T., Lietzén, N., Lahesmaa, R., Vehtari, A. & Lähdesmäki, H., 17 Apr 2019, In : Nature Communications. 10, 1, p. 1-11 11 p., 1798.

    Research output: Contribution to journalArticleScientificpeer-review

    Open Access
    File
  • 4 Citations (Scopus)
    140 Downloads (Pure)

    Bayesian metabolic flux analysis reveals intracellular flux couplings

    Heinonen, M., Osmala, M., Mannerström, H., Wallenius, J., Kaski, S., Rousu, J. & Lähdesmäki, H., 15 Jul 2019, In : Bioinformatics. 35, 14, p. i548-i557 btz315.

    Research output: Contribution to journalArticleScientificpeer-review

    Open Access
    File
  • 1 Citation (Scopus)
    86 Downloads (Pure)

    Projects

    Bridging the Reality Gap in Autonomous Learning

    Lähdesmäki, H. & Iakovlev, V.

    01/01/202031/12/2022

    Project: Academy of Finland: Other research funding

    FCAI: Finnish Center for Artificial Intelligence (FCAI)

    Lähdesmäki, H.

    01/01/201931/12/2022

    Project: Academy of Finland: Other research funding

    Immunoregulation and Therapeutic Precision in Rheumatoid Arthritis

    Jokinen, E., Lähdesmäki, H., Rehn, E. & Dumitrescu, A.

    01/01/201831/12/2020

    Project: Academy of Finland: Other research funding

    Quantifying molecular networks at single-cell level

    Lähdesmäki, H., Mannerström, H., Intosalmi, J., Somani, J., Tikhonov, G. & Gadd, C.

    01/09/201731/08/2021

    Project: Academy of Finland: Other research funding

    FGCI: Finnish Grid and Cloud Infrastructure Stage 2 : enabling data sciences

    Lähdesmäki, H.

    01/01/201831/12/2019

    Project: Academy of Finland: Other research funding

    Prizes

    Elias Tillandz prize 2012 for article

    Harri Lähdesmäki (Recipient), 2012

    Prize: Award or honor granted for a specific work

  • Elias Tillandz prize 2013 for article

    Harri Lähdesmäki (Recipient), 2013

    Prize: Award or honor granted for a specific work

  • IARIA Best Paper Award for our paper

    Harri Lähdesmäki (Recipient), 2008

    Prize: Award or honor granted for a specific work

  • Tampere Science Foundation award for the best doctoral thesis

    Harri Lähdesmäki (Recipient), 2005

    Prize: Award or honor granted for a specific work

  • Activities

    Foreign Organisation

    Harri Lähdesmäki (Visiting researcher)
    18 May 2016

    Activity: Visiting an external institution typesVisit abroad

    Evaluator of a docent application, at University of Helsinki

    Harri Lähdesmäki (Examiner)
    2016

    Activity: Examination typesStatement of assessment of docentship

    Foreign Organisation

    Harri Lähdesmäki (Visiting researcher)
    30 Mar 20163 Apr 2016

    Activity: Visiting an external institution typesVisit abroad

    School of Science (Organisational unit)

    Harri Lähdesmäki (Member)
    Mar 2016Jan 2017

    Activity: Membership typesPosition of trust in an academic community

    International Workshop on Machine Learning in Systems Biology

    Harri Lähdesmäki (Member)
    3 Sep 20164 Sep 2016

    Activity: Participating in or organising an event typesMembership of an organizing committee or other positions of trust of a conference or a seminar

    Press / Media

    Biologisten mekanismien alkulähteillä

    Harri Lähdesmäki

    16/05/2019

    1 item of Media coverage

    Press/Media: Media appearance

    Aalto University team wins AI research award

    Harri Lähdesmäki, Markus Heinonen & Samuel Kaski

    24/04/2019

    1 item of Media coverage

    Press/Media: Media appearance

    Finnish Research Group Discovers a New Immune System Regulator

    Harri Lähdesmäki

    22/02/2018

    1 item of Media coverage

    Press/Media: Media appearance