Dogu Baran Aydogan

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Expertise related to UN Sustainable Development Goals

In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):

Education/Academic qualification

Doctoral degree, Engineering and Technology, Tampere University of Technology

Award Date: 13 Aug 2014

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23 Article
12 Conference contribution
2 Paper
1 Doctoral Thesis

DELMEP : a deep learning algorithm for automated annotation of motor evoked potential latencies
Milardovich, D., Souza, V. H., Zubarev, I., Tugin, S., Nieminen, J. O., Bigoni, C., Hummel, F. C., Korhonen, J. T., Aydogan, D. B., Lioumis, P., Taherinejad, N., Grasser, T. & Ilmoniemi, R. J., Dec 2023, In: Scientific Reports. 13, 1, p. 1-11 11 p., 8225.
Research output: Contribution to journal › Article › Scientific › peer-review

Open Access
File
7 Downloads (Pure)
Depression core network-based individualized targeting for transcranial magnetic stimulation
Raij, T. T., Komulainen, E., Aydogan, D. B., Pamilo, S., Isometsä, E. & Raij, T., 1 Mar 2023, In: Brain Stimulation. 16, 2, p. 619-627 9 p.
Research output: Contribution to journal › Article › Scientific › peer-review

Open Access
File
1 Citation (Scopus)

20 Downloads (Pure)
FreeSurfer 7 quality control : Key problem areas and importance of manual corrections
Vahermaa, V., Aydogan, D. B., Raij, T., Armio, R-L., Laurikainen, H., Saramäki, J. & Suvisaari, J., Oct 2023, In: NeuroImage. 279, p. 1-6 6 p., 120306.
Research output: Contribution to journal › Article › Scientific › peer-review

Open Access
File
56 Downloads (Pure)
Limb-specific thalamocortical tracts are impaired differently in hemiplegic and diplegic subtypes of cerebral palsy
Jaatela, J., Aydogan, DB., Nurmi, T., Vallinoja, J., Maenpaa, H. & Piitulainen, H., 26 Sept 2023, In: Cerebral Cortex. 33, 19, p. 10245-10257 13 p.
Research output: Contribution to journal › Article › Scientific › peer-review

Open Access
File
4 Downloads (Pure)
Tractography passes the test : Results from the diffusion-simulated connectivity (disco) challenge
Girard, G., Rafael-Patiño, J., Truffet, R., Aydogan, D. B., Adluru, N., Nair, V. A., Prabhakaran, V., Bendlin, B. B., Alexander, A. L., Bosticardo, S., Gabusi, I., Ocampo-Pineda, M., Battocchio, M., Piskorova, Z., Bontempi, P., Schiavi, S., Daducci, A., Stafiej, A., Ciupek, D., Bogusz, F., & 46 othersPieciak, T., Frigo, M., Sedlar, S., Deslauriers-Gauthier, S., Kojčić, I., Zucchelli, M., Laghrissi, H., Ji, Y., Deriche, R., Schilling, K. G., Landman, B. A., Cacciola, A., Basile, G. A., Bertino, S., Newlin, N., Kanakaraj, P., Rheault, F., Filipiak, P., Shepherd, T. M., Lin, Y. C., Placantonakis, D. G., Boada, F. E., Baete, S. H., Hernández-Gutiérrez, E., Ramírez-Manzanares, A., Coronado-Leija, R., Stack-Sánchez, P., Concha, L., Descoteaux, M., Mansour L．, S., Seguin, C., Zalesky, A., Marshall, K., Canales-Rodríguez, E. J., Wu, Y., Ahmad, S., Yap, P. T., Théberge, A., Gagnon, F., Massi, F., Fischi-Gomez, E., Gardier, R., Haro, J. L. V., Pizzolato, M., Caruyer, E. & Thiran, J. P., 15 Aug 2023, In: NeuroImage. 277, 120231.
Research output: Contribution to journal › Article › Scientific › peer-review

Open Access
File
4 Downloads (Pure)

1 Active
2 Finished

ConnectToBrain: Connecting to the Networks of the Human Brain
Ilmoniemi, R., Aydogan, D. B., Sinisalo, H., Li, L., Mäkinen, A., Pankka, H., Souza, V., Makkonen, M., Nieminen, A., Nissilä, I., Laine, M., Parvin, S., Rissanen, I., Kicic, D., Lioumis, P., Koistinen, L., Kahilakoski, O., Raij, T., Soto de la Cruz, A., Tommila, T., Ylöstalo, T., Ukharova, E., Metsomaa, J., Vaalto, S., Granö, I., Koponen, M., Roine, T., Lujala, A., Ilmoniemi, I., Nurmi, S., Ahola, O. & Hämäläinen, K.
01/08/2019 → 31/08/2026
Project: EU: ERC grants
Electronic–Robotic Perturb-and-Measure Brain Scanner
Ilmoniemi, R., Aydogan, D. B., Lioumis, P., Souza, V., Soto de la Cruz, A., Lehto, I., Sinisalo, H., Salo, K., Granö, I., Vaalto, S. & Koponen, L.
01/09/2017 → 28/02/2022
Project: Academy of Finland: Other research funding
Proprioception in sensorimotor integration in health and disease
Piitulainen, H., Nurmi, T., Aydogan, D. B. & Matilainen, N.
01/09/2016 → 31/08/2019
Project: Academy of Finland: Other research funding

Code used in article "Detecting corticospinal tract impairment in tumor patients with fiber density and tensor-based metrics".
Fekonja, L. S. (Creator), Wang, Z. (Creator), Aydogan, D. B. (Creator), Roine, T. (Creator), Engelhardt, M. (Creator), Dreyer, F. R. (Creator), Vajkoczy, P. (Creator) & Picht, T. (Creator), Zenodo, 2020
DOI: 10.5281/zenodo.3732348
Dataset: Software or code
DELMEP: A deep learning algorithm for automated annotation of motor evoked potential latencies
Milardovich, D. (Creator), Souza, V. (Creator), Zubarev, I. (Creator), Tugin, S. (Creator), Nieminen, J. (Creator), Bigoni, C. (Creator), Hummel, F. C. (Creator), Korhonen, J. (Creator), Aydogan, D. B. (Creator), Lioumis, P. (Creator), Taherinejad, N. (Creator), Grasser, T. (Creator) & Ilmoniemi, R. (Creator), Zenodo, 10 May 2023
DOI: 10.5281/zenodo.7920466, https://zenodo.org/record/7920467
Dataset: Software or code

Diffusion MRI processing pipeline for real-time tractography-based nTMS
Aydogan, Dogu Baran (Recipient), Souza, Victor (Recipient) & Ilmoniemi, Risto (Recipient), 9 Nov 2019
Prize: Award or honor granted for a specific work
ISBI 3-D Validation of Tractography with Experimental MRI (3D VoTEM)
Aydogan, Dogu Baran (Recipient), 2018
Prize: Invitation or ranking in competition
ISMRM Tractography-reproducibility Challenge with Empirical Data (TraCED)
Aydogan, Dogu Baran (Recipient), 2017
Prize: Invitation or ranking in competition
MICCAI CDMRI'21 DiSCo Tractography Challenge
Aydogan, Dogu Baran (Recipient), 2021
Prize: Invitation or ranking in competition
MICCAI IronTract Tractography Challenge 2019 (Round 1)
Aydogan, Dogu Baran (Recipient), 2019
Prize: Invitation or ranking in competition

4 Membership of a scientific or program committee of a conference or seminar
2 Membership of an organizing committee or other positions of trust of a conference or a seminar

MICCAI International Workshop on Computational Diffusion MRI
Dogu Baran Aydogan (Member)
2021
Activity: Participating in or organising an event types › Membership of a scientific or program committee of a conference or seminar
OHBM EquinoX Twitter Conference
Dogu Baran Aydogan (Organiser)
2020
Activity: Participating in or organising an event types › Membership of an organizing committee or other positions of trust of a conference or a seminar
MICCAI International Workshop on Computational Diffusion MRI
Dogu Baran Aydogan (Member)
2020
Activity: Participating in or organising an event types › Membership of a scientific or program committee of a conference or seminar
MICCAI International Workshop on Computational Diffusion MRI
Dogu Baran Aydogan (Member)
2019
Activity: Participating in or organising an event types › Membership of a scientific or program committee of a conference or seminar
Brain Twitter Conference
Dogu Baran Aydogan (Organiser)
2019
Activity: Participating in or organising an event types › Membership of an organizing committee or other positions of trust of a conference or a seminar

Dogu Baran Aydogan

Personal profile

Expertise related to UN Sustainable Development Goals

Education/Academic qualification

Fingerprint

Collaborations and top research areas from the last five years

Dive into details

DELMEP : a deep learning algorithm for automated annotation of motor evoked potential latencies

Depression core network-based individualized targeting for transcranial magnetic stimulation

FreeSurfer 7 quality control : Key problem areas and importance of manual corrections

Limb-specific thalamocortical tracts are impaired differently in hemiplegic and diplegic subtypes of cerebral palsy

Tractography passes the test : Results from the diffusion-simulated connectivity (disco) challenge

ConnectToBrain: Connecting to the Networks of the Human Brain

Electronic–Robotic Perturb-and-Measure Brain Scanner

Proprioception in sensorimotor integration in health and disease

Code used in article "Detecting corticospinal tract impairment in tumor patients with fiber density and tensor-based metrics".

DELMEP: A deep learning algorithm for automated annotation of motor evoked potential latencies

Diffusion MRI processing pipeline for real-time tractography-based nTMS

ISBI 3-D Validation of Tractography with Experimental MRI (3D VoTEM)

ISMRM Tractography-reproducibility Challenge with Empirical Data (TraCED)

MICCAI CDMRI'21 DiSCo Tractography Challenge

MICCAI IronTract Tractography Challenge 2019 (Round 1)

MICCAI International Workshop on Computational Diffusion MRI

OHBM EquinoX Twitter Conference

MICCAI International Workshop on Computational Diffusion MRI

MICCAI International Workshop on Computational Diffusion MRI

Brain Twitter Conference

Dogu Baran Aydogan

Personal profile

Expertise related to UN Sustainable Development Goals

Education/Academic qualification

Fingerprint

Collaborations and top research areas from the last five years

Research output

Projects

Datasets

Prizes

Activities