Professorship Rousu Juho

UN Sustainable Development Goals

In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. Our work contributes towards the following SDG(s):

Robert Armah-Sekum
- Department of Computer Science - Doctoral Researcher
- School of Science
- Professorship Rousu Juho - Doctoral Researcher
Person: Doctoral students, Doctoral Student
20212024
Jaakko Hollmen
- Department of Computer Science - Senior University Lecturer
- Computer Science Lecturers - Senior University Lecturer
- Lecturer Hollmen Jaakko group - Senior University Lecturer
- Professorship Rousu Juho - Senior University Lecturer
- Helsinki Institute for Information Technology (HIIT) - Senior University Lecturer
Person: Teaching staff
19962023
Riikka Huusari
- Department of Computer Science - Visitor (Faculty)
- Professorship Rousu Juho - Postdoctoral Researcher, Visitor (Faculty)
Person: Postdoctoral researchers, Visiting Scholar
20172024

67 Article
25 Conference article in proceedings
4 Review Article
4 Doctoral Thesis
More

Attention-based approach to predict drug–target interactions across seven target superfamilies
Schulman, A., Rousu, J., Aittokallio, T. & Tanoli, Z., 1 Aug 2024, In: Bioinformatics. 40, 8, p. 1-14 14 p., btae496.
Research output: Contribution to journal › Article › Scientific › peer-review

Open Access
File
19 Downloads (Pure)
Chemical reaction enhanced graph learning for molecule representation
Li, A., Casiraghi, E. & Rousu, J., 1 Oct 2024, In: Bioinformatics (Oxford, England). 40, 10, p. 1-9 9 p., btae558.
Research output: Contribution to journal › Article › Scientific › peer-review

Open Access
File
15 Downloads (Pure)
Data-Driven Compound Identification in Atmospheric Mass Spectrometry
Sandström, H., Rissanen, M. P., Rousu, J. & Rinke, P., 23 Feb 2024, In: Advanced Science. 11, 8, 17 p., 2306235.
Research output: Contribution to journal › Article › Scientific › peer-review

Open Access
File
3 Citations (Scopus)

52 Downloads (Pure)

Dataset: "Probabilistic Framework for Integration of Mass Spectrum and Retention Time Information in Small Molecule Identification"
Bach, E. (Creator), Zenodo, 1 Apr 2020
DOI: 10.5281/zenodo.4305918
Dataset
Metabolite identification dataset: "Magnitude-Preserving Ranking for Structured Outputs" Brouard et al. (2017)
Bach, E. (Creator), Zenodo, 2022
DOI: 10.5281/zenodo.7189944, https://zenodo.org/record/7189944
Dataset
LC-MS² meta data for each MassBank (MB) subset
Bach, E. (Creator), Zenodo, 2022
DOI: 10.5281/zenodo.7056047, https://zenodo.org/record/7056047
Dataset

Best paper award, International Conference on Bioinformatics Models, Methods and Algorithms, Valencia, Spain
Rousu, J. (Recipient), 2010
Prize: Award or honor granted for a specific work
Best paper finalist and runner-up award, Computer Track
Hollmen, J. (Recipient), Särkkä, S. (Recipient) & Rinta-Koski, O.-P. (Recipient), 15 Dec 2017
Prize: Award or honor granted for a specific work
PhD thesis award
Rousu, J. (Supervisor) & Shen, H. (Recipient), 11 May 2018
Prize: Award or honor granted for a specific work

NAR Genomics and Bioinformatics (Journal)
Armah-Sekum, R. (Reviewer)
24 Jun 2024 → 18 Jul 2024
Activity: Publication peer-review and editorial work types › Reviewer of scientific journal
Scalable variable selection for two-view learning tasks with projection operators
Huusari, R. (Speaker)
8 Nov 2023
Activity: Talk or presentation types › Conference presentation
Asian Conference of Machine Learning
Huusari, R. (Member)
11 Nov 2023 → 14 Nov 2023
Activity: Participating in or organising an event types › Participant of a conference, workshop, session, tutorial or event

-Stockholm University: 'The real game changer is when regular glasses become smart'
Hollmen, J.
04/01/2024
2 items of Media coverage
Press/Media: Media appearance
Researchers from Aalto University Describe Findings in Transportation Engineering (A Bayesian Optimization Approach for Calibrating Large-Scale Activity-Based Transport Models)
Hollmen, J., Roncoli, C. & Agriesti, S.
07/11/2023
1 item of Media coverage
Press/Media: Media appearance
Solujemme sotkuisia ”lankakeriä” avataan nyt helposti – tutkijat löytävät proteiinien avulla lääkkeitä ja entsyymejä
Garg, V. & Rousu, J.
15/06/2023
1 item of Media coverage
Press/Media: Media appearance

Professorship Rousu Juho

UN Sustainable Development Goals

Collaborations and top research areas from the last five years

Dive into details

Robert Armah-Sekum

Jaakko Hollmen

Riikka Huusari

Attention-based approach to predict drug–target interactions across seven target superfamilies

Chemical reaction enhanced graph learning for molecule representation

Data-Driven Compound Identification in Atmospheric Mass Spectrometry

Dataset: "Probabilistic Framework for Integration of Mass Spectrum and Retention Time Information in Small Molecule Identification"

Metabolite identification dataset: "Magnitude-Preserving Ranking for Structured Outputs" Brouard et al. (2017)

LC-MS² meta data for each MassBank (MB) subset

Best paper award, International Conference on Bioinformatics Models, Methods and Algorithms, Valencia, Spain

Best paper finalist and runner-up award, Computer Track

PhD thesis award

NAR Genomics and Bioinformatics (Journal)

Scalable variable selection for two-view learning tasks with projection operators

Asian Conference of Machine Learning

-Stockholm University: 'The real game changer is when regular glasses become smart'

Researchers from Aalto University Describe Findings in Transportation Engineering (A Bayesian Optimization Approach for Calibrating Large-Scale Activity-Based Transport Models)

Solujemme sotkuisia ”lankakeriä” avataan nyt helposti – tutkijat löytävät proteiinien avulla lääkkeitä ja entsyymejä

Professorship Rousu Juho

UN Sustainable Development Goals

Collaborations and top research areas from the last five years

Profiles

Research output

Datasets

Prizes

Activities

Press/Media