Research output per year
Research output per year
UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. Our work contributes towards the following SDG(s):
Network
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
Profiles
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Manuel Haussmann
- Department of Computer Science - Postdoctoral Researcher
- Probabilistic Machine Learning - Postdoctoral Researcher
- Professorship Lähdesmäki Harri - Postdoctoral Researcher
- Professorship Kaski Samuel - Postdoctoral Researcher
Person: Postdoctoral researchers
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Markus Heinonen
- Department of Computer Science - Academy Research Fellow
- Probabilistic Machine Learning - Academy Research Fellow
- Professorship Lähdesmäki Harri - Academy Research Fellow
Person: Other teaching and research staff
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Emmi Jokinen
- School common, SCI
- Professorship Lähdesmäki Harri - Doctoral Candidate
Person: Doctoral students, Doctoral studies
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ChromDMM: a Dirichlet-multinomial mixture model for clustering heterogeneous epigenetic data
Osmala, M., Eraslan, G. & Lähdesmäki, H., 15 Aug 2022, In: Bioinformatics. 38, 16, p. 3863-3870 8 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile3 Downloads (Pure) -
Early DNA methylation changes in children developing beta cell autoimmunity at a young age
Starskaia, I., Laajala, E., Grönroos, T., Härkönen, T., Junttila, S., Kattelus, R., Kallionpää, H., Laiho, A., Suni, V., Tillmann, V., Lund, R., Elo, L. L., Lähdesmäki, H., Knip, M., Kalim, U. U. & Lahesmaa, R., May 2022, In: Diabetologia. 65, 5, p. 844-860 17 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile1 Citation (Scopus)14 Downloads (Pure) -
Evolution and modulation of antigen-specific T cell responses in melanoma patients
Huuhtanen, J., Chen, L., Jokinen, E., Kasanen, H., Lönnberg, T., Kreutzman, A., Peltola, K., Hernberg, M., Wang, C., Yee, C., Lähdesmäki, H., Davis, M. M. & Mustjoki, S., 11 Oct 2022, In: Nature Communications. 13, 1, p. 1-14 14 p., 5988.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile7 Downloads (Pure)
Datasets
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Probabilistic modeling methods for cell-free DNA methylation based cancer classification
Halla-aho, V. (Contributor) & Lähdesmäki, H. (Contributor), 1 Jan 2022
DOI: 10.6084/m9.figshare.c.5931075.v1, https://springernature.figshare.com/collections/Probabilistic_modeling_methods_for_cell-free_DNA_methylation_based_cancer_classification/5931075/1 and 4 more links, https://springernature.figshare.com/articles/dataset/Additional_file_2_of_Probabilistic_modeling_methods_for_cell-free_DNA_methylation_based_cancer_classification/19518510/1, https://springernature.figshare.com/articles/dataset/Additional_file_3_of_Probabilistic_modeling_methods_for_cell-free_DNA_methylation_based_cancer_classification/19518513/1, https://springernature.figshare.com/articles/dataset/Additional_file_4_of_Probabilistic_modeling_methods_for_cell-free_DNA_methylation_based_cancer_classification/19518516/1, https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_Probabilistic_modeling_methods_for_cell-free_DNA_methylation_based_cancer_classification/19518507/1 (show fewer)
Dataset
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Genome wide analysis of protein production load in Trichoderma reesei
Pakula, T. M. (Contributor), Nygren, H. (Contributor), Barth, D. (Contributor), Heinonen, M. (Contributor), Castillo, S. (Contributor), Penttilä, M. (Creator) & Arvas, M. (Contributor), 1 Jan 2016
DOI: 10.6084/m9.figshare.c.3603251.v1, https://figshare.com/collections/Genome_wide_analysis_of_protein_production_load_in_Trichoderma_reesei/3603251/1
Dataset
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Permutation-based significance analysis reduces the type 1 error rate in bisulfite sequencing data analysis of human umbilical cord blood samples
Laajala, E. (Creator), Halla-aho, V. (Creator), Grönroos, T. (Creator), Kalim, U. U. (Creator), Vähä-Mäkilä, M. (Creator), Nurmio, M. (Creator), Kallionpää, H. (Creator), Lietzén, N. (Creator), Mykkänen, J. (Creator), Rasool, O. (Creator), Toppari, J. (Creator), University, M. (Creator), Knip, M. (Creator), Lund, R. (Creator), Lahesmaa, R. (Creator) & Lähdesmäki, H. (Creator), 2022
DOI: 10.6084/m9.figshare.19311109.v2, https://tandf.figshare.com/articles/dataset/Permutation-based_significance_analysis_reduces_the_type_1_error_rate_in_bisulfite_sequencing_data_analysis_of_human_umbilical_cord_blood_samples/19311109/1
Dataset
Activities
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International Conference on Machine Learning
Maria Osmala (Member)
12 Jul 2020 → 18 Jul 2020Activity: Participating in or organising an event types › Participant of a conference, workshop, session, tutorial or event
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IEEE Access (Journal)
Juho Timonen (Reviewer)
28 Sep 2020Activity: Publication peer-review and editorial work types › Reviewer of scientific journal
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Faster Bayesian inference in Joint Species Distribution Models
Gleb Tikhonov (Speaker), Jarno Vanhatalo (Contributor), Otso Ovaskainen (Contributor) & Harri Lähdesmäki (Contributor)
22 Jun 2020 → 26 Jun 2020Activity: Talk or presentation types › Conference presentation
Press / Media
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Strengthening nonparametric Bayesian methods with structured kernels
Markus Heinonen & Samuel Kaski
09/11/2022
1 item of Media coverage
Press/Media: Media appearance
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Finnish firms seek better therapies
Jani Huuhtanen & Harri Lähdesmäki
03/11/2022
1 item of Media coverage
Press/Media: Media appearance
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