Professorship Kaski S.
Organisational unit: Research group
Research outputs
- 2020
- Published
High-dimensional structure learning of binary pairwise Markov networks: A comparative numerical study
Pensar, J., Xu, Y., Puranen, S., Pesonen, M., Kabashima, Y. & Corander, J., 1 Jan 2020, In : Computational Statistics and Data Analysis. 141, p. 62-76 15 p.Research output: Contribution to journal › Article › Scientific › peer-review
- 2019
- Accepted/In press
Machine Teaching of Active Sequential Learners
Peltola, T., Çelikok, M. M., Daee, P. & Kaski, S., 28 Nov 2019, (Accepted/In press) 33rd Conference on Neural Information Processing Systems (NeurIPS 2019). p. 11202-11213 12 p.Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
- Published
Geometry-aware relational exemplar attention for dense captioning
Wang, T. J. J., Tavakoli, H. R., Sjöberg, M. & Laaksonen, J., 15 Oct 2019, MULEA 2019 - 1st International Workshop on Multimodal Understanding and Learning for Embodied Applications, co-located with MM 2019. p. 3-11 9 p.Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
- Published
Modelling G×E with historical weather information improves genomic prediction in new environments
Gillberg, J., Marttinen, P., Mamitsuka, H. & Kaski, S., 15 Oct 2019, In : Bioinformatics (Oxford, England). 35, 20, p. 4045-4052 8 p.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Genome-wide epistasis and co-selection study using mutual information
Pensar, J., Puranen, S., Arnold, B., MacAlasdair, N., Kuronen, J., Tonkin-Hill, G., Pesonen, M., Xu, Y., Sipola, A., Sánchez-Busó, L. & 7 others, , 10 Oct 2019, In : Nucleic Acids Research. 47, 18, p. 1-14 e112.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Local dimension reduction of summary statistics for likelihood-free inference
Siren, J. & Kaski, S., 4 Oct 2019, In : STATISTICS AND COMPUTING. 12 p.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Fuzzy least squares twin support vector machines
Sartakhti, J. S., Afrabandpey, H. & Ghadiri, N., 1 Oct 2019, In : ENGINEERING APPLICATIONS OF ARTIFICIAL INTELLIGENCE. 85, p. 402-409 8 p.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Single-subject analysis of N400 event-related potential component with five different methods
Kallionpää, R. E., Pesonen, H., Scheinin, A., Sandman, N., Laitio, R., Scheinin, H., Revonsuo, A. & Valli, K., 1 Oct 2019, In : International Journal of Psychophysiology. 144, p. 14-24 11 p.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Is the potential B2B buyer interested or ready to buy? Estimating the stage of the B2B buying behavior
Barzegar Marvasti, N., Aug 2019.Research output: Contribution to conference › Abstract › Scientific › peer-review
- Published
ADAPTIVE: LeArning DAta-dePendenT, concIse molecular VEctors for fast, accurate metabolite identification from tandem mass spectra
Nguyen, D. H., Nguyen, C. H. & Mamitsuka, H., 15 Jul 2019, In : Bioinformatics. 35, 14, p. i164-i172 btz319.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Bayesian metabolic flux analysis reveals intracellular flux couplings
Heinonen, M., Osmala, M., Mannerström, H., Wallenius, J., Kaski, S., Rousu, J. & Lähdesmäki, H., 15 Jul 2019, In : Bioinformatics. 35, 14, p. i548-i557 btz315.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Block HSIC Lasso: Model-free biomarker detection for ultra-high dimensional data
Climente-González, H., Azencott, C. A., Kaski, S. & Yamada, M., 15 Jul 2019, In : Bioinformatics. 35, 14, p. i427-i435 btz333.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Representation transfer for differentially private drug sensitivity prediction
Niinimäki, T., Heikkilä, M. A., Honkela, A. & Kaski, S., 15 Jul 2019, In : Bioinformatics. 35, 14, p. i218-i224 btz373.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
NetGO: improving large-scale protein function prediction with massive network information
You, R., Yao, S., Xiong, Y., Huang, X., Sun, F., Mamitsuka, H. & Zhu, S., 2 Jul 2019, In : Nucleic Acids Research. 47, W1, p. W379-W387Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Learning Image Relations with Contrast Association Networks
Lu, Y., Yang, Z., Kannala, J. & Kaski, S., 1 Jul 2019, 2019 International Joint Conference on Neural Networks, IJCNN 2019. Institute of Electrical and Electronics Engineers, 7 p. 8852344. (Proceedings of the International Joint Conference on Neural Networks; vol. 2019-July).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
- Published
Human-in-the-loop Active Covariance Learning for Improving Prediction in Small Data Sets
Afrabandpey, H., Peltola, T. & Kaski, S., Jul 2019, Proceedings of the 28th International Joint Conference on Artificial Intelligence, IJCAI 2019. p. 1959-1966 8 p. (IJCAI International Joint Conference on Artificial Intelligence).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
- Published
Variable opportunities for outcrossing result in hotspots of novel genetic variation in a pathogen metapopulation
Laine, A-L., Barres, B., Numminen, E. & Siren, J. P., 18 Jun 2019, In : ELIFE. 8, p. 1-17 17 p., 47091.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen
AstraZeneca-Sanger Drug Combination DREAM Consortium, Kaski, S. & Marttinen, P., 17 Jun 2019, In : Nature Communications. 10, 1, p. 1-17 17 p., 2674.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
- Published
Parameter Inference for Computational Cognitive Models with Approximate Bayesian Computation
Kangasrääsiö, A., Jokinen, J. P. P., Oulasvirta, A., Howes, A. & Kaski, S., 1 Jun 2019, In : COGNITIVE SCIENCE. 43, 6, 40 p., 12738.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Variable opportunities for outcrossing result in hotspots of novel genetic variation in a pathogen metapopulation: Spatially variable opportunities for outcrossing in an obligate pathogen
Laine, A. L., Barrès, B., Numminen, E. & Sirén, J. P., 1 Jun 2019, In : ELIFE. 8Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Efficient acquisition rules for model-based approximate Bayesian computation
Järvenpää, M., Gutmann, M. U., Pleska, A., Vehtari, A. & Marttinen, P., Jun 2019, In : Bayesian Analysis. 14, 2, p. 595-622 28 p.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Emergence of ceftazidime-avibactam-resistant Klebsiella pneumoniae during treatment, Finland, December 2018
Räisänen, K., Koivula, I., Ilmavirta, H., Puranen, S., Kallonen, T., Lyytikäinen, O. & Jalava, J., 1 May 2019, In : EUROSURVEILLANCE. 24, 19, p. 1-3Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Harmonizable mixture kernels with variational Fourier features
Shen, Z., Heinonen, M. & Kaski, S., May 2019, The 22nd International Conference on Artificial Intelligence and Statistic. p. 1812-1821 (Proceedings of Machine Learning Research; vol. 89).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
- Published
A Bayesian model of acquisition and clearance of bacterial colonization incorporating within-host variation
Järvenpää, M., Sater, M. R. A., Lagoudas, G. K., Blainey, P. C., Miller, L. G., McKinnell, J. A., Huang, S. S., Grad, Y. H. & Marttinen, P., 1 Apr 2019, In : PLoS computational biology. 15, 4, p. 1-25 e1006534.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Discovering heritable modes of MEG spectral power
Leppäaho, E., Renvall, H., Salmela, E., Kere, J., Salmelin, R. & Kaski, S., 1 Apr 2019, In : Human Brain Mapping . 40, 5, p. 1391-1402 12 p.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Gaussian kernels for incomplete data
Mesquita, D. P. P., Gomes, J. P. P., Corona, F., Souza, A. H. & Nobre, J. S., 1 Apr 2019, In : Applied Soft Computing Journal. 77, p. 356-365 10 p.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Mobile Brainwaves: On the Interchangeability of Simple authentication Tasks with Low-Cost, Single-Electrode EEG Devices
Haukipuro, E-S., Kolehmainen, V., Myllärinen, J., Remander, S., Salo, J., Takko, T., Nguyen, L., Sigg, S. & Findling, R., 1 Apr 2019, In : IEICE Transactions on Communications. E102-B, 4, p. 760-767 8 p.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Deep learning with differential Gaussian process flows
Hegde, P., Heinonen, M., Lähdesmäki, H. & Kaski, S., Apr 2019, The 22nd International Conference on Artificial Intelligence and Statistic. Vol. 89. p. 1-15 16 p. (Proceedings of Machine Learning Research; vol. 89).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
- Published
Integrating neurophysiologic relevance feedback in intent modeling for information retrieval
Jacucci, G., Barral, O., Daee, P., Wenzel, M., Serim, B., Ruotsalo, T., Pluchino, P., Freeman, J., Gamberini, L., Kaski, S. & 1 others, , 12 Mar 2019, In : JOURNAL OF THE ASSOCIATION FOR INFORMATION SCIENCE AND TECHNOLOGY. 14 p.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Digging deeper into egocentric gaze prediction
Tavakoli, H. R., Rahtu, E., Kannala, J. & Borji, A., 4 Mar 2019, Proceedings - 2019 IEEE Winter Conference on Applications of Computer Vision, WACV 2019. Institute of Electrical and Electronics Engineers, p. 273-282 10 p. 8658619Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
- Published
Semantic matching by weakly supervised 2D point set registration
Laskar, Z., Tavakoli, H. R. & Kannala, J., 4 Mar 2019, 2019 IEEE WINTER CONFERENCE ON APPLICATIONS OF COMPUTER VISION (WACV). Institute of Electrical and Electronics Engineers, p. 1061-1069 9 p. 8658796Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
- Published
Integrated analysis of population genomics, transcriptomics and virulence provides novel insights into Streptococcus pyogenes pathogenesis
Kachroo, P., Eraso, J. M., Olsen, R. J., Beres, S. B., Zhu, L., Nasser, W., Bernard, P. E., Cantu, C. C., Saavedra, M. O., Arredondo, M. J. & 21 others, , 1 Mar 2019, In : NATURE GENETICS. 51, 3, p. 548-559 12 p.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Maternal pre- and postnatal anxiety symptoms and infant attention disengagement from emotional faces
Kataja, E. L., Karlsson, L., Parsons, C. E., Pelto, J., Pesonen, H., Häikiö, T., Hyönä, J., Nolvi, S., Korja, R. & Karlsson, H., 15 Jan 2019, In : Journal of Affective Disorders. 243, p. 280-289 10 p.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
A Faster Tree-Decomposition Based Algorithm for Counting Linear Extensions
Kangas, K., Koivisto, M. & Salonen, S., 1 Jan 2019, In : Algorithmica.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Artificial Neural Networks with Random Weights for Incomplete Datasets
Mesquita, D. P. P., Gomes, J. P. P. & Rodrigues, L. R., 1 Jan 2019, In : Neural Processing Letters. 28 p.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
CalCleaveMKL: a Tool for Calpain Cleavage Prediction
duVerle, D. A. & Mamitsuka, H., 1 Jan 2019, Calpain. p. 121-147 27 p. (Methods in molecular biology; vol. 1915).Research output: Chapter in Book/Report/Conference proceeding › Chapter › Scientific › peer-review
- Published
Distributed Bayesian matrix factorization with limited communication
Qin, X., Blomstedt, P., Leppäaho, E., Parviainen, P. & Kaski, S., 1 Jan 2019, In : Machine Learning. p. 1-26Research output: Contribution to journal › Article › Scientific › peer-review
- Accepted/In press
Embarrassingly parallel MCMC using deep invertible transformations
Mesquita, D., Blomstedt, P. & Kaski, S., 1 Jan 2019, (Accepted/In press) Proceedings of the Thirty-Fifth Conference on Uncertainty in Artificial Intelligence, UAI 2019, Tel Aviv, Israel, July 22-25, 2019. AUAI PressResearch output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
- Published
Multi-stream Convolutional Networks for Indoor Scene Recognition
Anwer, R. M., Khan, F. S., Laaksonen, J. & Zaki, N., 1 Jan 2019, Computer Analysis of Images and Patterns - 18th International Conference, CAIP 2019, Proceedings. Vento, M. & Percannella, G. (eds.). Springer Verlag, p. 196-208 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11678 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
- Published
Scalable Bayesian non-linear matrix completion
Qin, X., Blomstedt, P. & Kaski, S., 1 Jan 2019, Proceedings of the 28th International Joint Conference on Artificial Intelligence, IJCAI 2019. Kraus, S. (ed.). p. 3275-3281 7 p. (IJCAI International Joint Conference on Artificial Intelligence; vol. 2019-August).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
- E-pub ahead of print
Scaling up the effects of inbreeding depression from individuals to metapopulations
Nonaka, E., Sirén, J., Somervuo, P., Ruokolainen, L., Ovaskainen, O. & Hanski, I., 1 Jan 2019, In : Journal of Animal Ecology.Research output: Contribution to journal › Article › Scientific › peer-review
- Published
Tiler: Software for human-guided data exploration
Henelius, A., Oikarinen, E. & Puolamäki, K., 1 Jan 2019, Machine Learning and Knowledge Discovery in Databases - European Conference, ECML PKDD 2018, Proceedings. Brefeld, U., Marascu, A., Pinelli, F., Curry, E., MacNamee, B., Hurley, N., Daly, E. & Berlingerio, M. (eds.). Springer Verlag, p. 672-676 5 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11053 LNAI).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
- Published
Towards Cycle-Consistent Models for Text and Image Retrieval
Cornia, M., Baraldi, L., Rezazadegan Tavakoli, H. & Cucchiara, R., 1 Jan 2019, Computer Vision – ECCV 2018 Workshops, Proceedings. Leal-Taixé, L. & Roth, S. (eds.). p. 687-691 5 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11132 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
- Published
Tree-structured hierarchical Dirichlet process
Alam, M. H., Peltonen, J., Nummenmaa, J. & Järvelin, K., 1 Jan 2019, Distributed Computing and Artificial Intelligence, Special Sessions, 15th International Conference. Rodríguez, S., Prieto, J., Faria, P., Moreno, M. N., Mazuelas, S., Navarro, E. M., Klos, S., Fernández, A. & Jiménez-López, M. D. (eds.). Springer Verlag, p. 291-299 9 p. (Advances in Intelligent Systems and Computing; vol. 801).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
- Published
Active Learning for Decision-Making from Imbalanced Observational Data
Sundin, I., Schulam, P., Siivola, E., Vehtari, A., Saria, S. & Kaski, S., 2019, Proceedings of the 36th International Conference on Machine Learning. (Proceedings of Machine Learning Research; vol. 97).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
- Published
A Multi-Task Bayesian Deep Neural Net for Detecting Life-Threatening Infant Incidents From Head Images
Wang, T-J. J., Laaksonen, J., Liao, Y-P., Wu, B-Z. & Shen, S-Y., 2019, 2019 IEEE International Conference on Image Processing (ICIP). IEEE, p. 3006-3010 5 p.Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
- Accepted/In press
Bottom-up Attention, Model of
Borji, A., Rezazadegan Tavakoli, H. & Bylinskii, Z., 2019, (Accepted/In press) Encyclopedia of Computational Neuroscience .Research output: Chapter in Book/Report/Conference proceeding › Chapter › Scientific › peer-review
- Accepted/In press
Deep convolutional Gaussian process
Blomqvist, K., Kaski, S. & Heinonen, M., 2019, (Accepted/In press) Proceedings of the European Conference on Machine Learning and Principles and Practice of Knowledge Discovery in Databases.Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
- Published
Fast and Robust Multi-View Multi-Task Learning via Group Sparsity
Sun, L., Nguyen, C. H. & Mamitsuka, H., 2019, Proceedings of the Twenty-Eighth International Joint Conference on Artificial Intelligence, IJCAI 2019, Macao, China, August 10-16, 2019. p. 3499-3505 7 p.Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
ID: 4319430