Computer Science - Artificial Intelligence and Machine Learning (AIML)

Search results

• LetterSampo: CKCC

  Hyvönen, E. (Supervisor), Leskinen, P. (Creator) & Tuominen, J. (Supervisor), Zenodo, 19 Nov 2021

  DOI: 10.5281/zenodo.5970105, https://seco.cs.aalto.fi/projects/rrl/ and 2 more links, https://www.ldf.fi/dataset/ckcc, http://ckcc.huygens.knaw.nl/epistolarium/ (show fewer)

  Dataset

• Data for NeurIPs 2021 submission: Spatio-Temporal Variational Gaussian Processes

  Hamelijnck, O. (Creator), Wilkinson, W. (Creator), Loppi, N. A. (Creator), Solin, A. (Creator) & Damoulas, T. (Creator), Zenodo, 2021

  DOI: 10.5281/zenodo.4531303, https://zenodo.org/record/4531304

  Dataset

• Medieval manuscripts and their migrations: Using SPARQL to investigate the research potential of an aggregated Knowledge Graph

  Burrows, T. (Contributor), Cleaver, L. (Contributor), Emery, D. (Contributor), Hyvönen, E. (Creator), Koho, M. (Contributor), Ransom, L. (Contributor), Thomson, E. (Contributor) & Wijsman, H. (Contributor), Zenodo, 21 Dec 2021

  DOI: 10.5281/zenodo.5796988, https://zenodo.org/record/5796988

  Dataset

• Additional file 3 of Probabilistic modeling methods for cell-free DNA methylation based cancer classification

  Halla-aho, V. (Creator) & Lähdesmäki, H. (Creator), figshare, 5 Apr 2022

  DOI: 10.6084/m9.figshare.19518513, https://springernature.figshare.com/articles/dataset/Additional_file_3_of_Probabilistic_modeling_methods_for_cell-free_DNA_methylation_based_cancer_classification/19518513

  Dataset

• VictoriaLyu/gpstuff: Evaluating Gaussian Process Metamodels and Sequential Designs for Noisy Level Set Estimation V1

  Vehtari, A. (Creator), Vanhatalo, J. (Creator), Sivula, T. (Creator), Solin, A. (Creator), Siivola, E. (Creator), Hartmann, M. (Creator), Steinhart, J. (Creator) & Karikomi, M. (Creator), Zenodo, 2021

  DOI: 10.5281/zenodo.4579993, https://zenodo.org/record/4579994

  Dataset: Software or code

• Mapping Manuscript Migrations Knowledge Graph

  Koho, M. (Creator), Tuominen, J. (Creator), Lewis, D. (Creator), Ikkala, E. (Creator), Heller, B. (Creator), Thomson, E. (Creator), Emery, D. (Creator), Porte, G. (Creator), Morrison, A. (Creator), Velios, A. (Creator), Wijsman, H. (Creator), Hyvönen, E. (Creator), Burrows, T. (Creator), Ransom, L. (Creator), Brix, A. (Creator), Myking, S. (Creator), Page, K. (Creator) & Fraas, M. (Creator), Zenodo, 20 Jan 2021

  DOI: 10.5281/zenodo.3632944, https://doi.org/10.5255%2Fukda-sn-854544

  Dataset

• Pre-rendered training and testing dataset for the paper Deep Convolutional Reconstruction for Gradient-Domain Rendering

  Kettunen, M. (Creator), Härkönen, E. (Creator) & Lehtinen, J. (Creator), Zenodo, 20 Dec 2019

  DOI: 10.5281/zenodo.3588466

  Dataset

• Dismec++

  Schultheis, E. (Creator) & Babbar, R. (Supervisor), Zenodo, 2022

  DOI: 10.5281/zenodo.6699586, https://zenodo.org/record/6699587

  Dataset: Software or code

• Drug combination data used for comboLTR in "Modeling drug combination effects via latent tensor reconstruction"

  Wang, T. (Creator), Szedmak, S. (Creator), Wang, H. (Creator), Aittokallio, T. (Creator), Pahikkala, T. (Creator), Cichonska, A. (Creator) & Rousu, J. (Creator), Zenodo, 2021

  DOI: 10.5281/zenodo.4625083, https://zenodo.org/record/4625084

  Dataset

• Protein function prediction through multi-view multi-label latent tensor reconstruction

  Armah-Sekum, R. E. (Creator), Szedmak, S. (Creator) & Rousu, J. (Creator), figshare, 3 May 2024

  DOI: 10.6084/m9.figshare.c.7215643.v1, https://springernature.figshare.com/collections/Protein_function_prediction_through_multi-view_multi-label_latent_tensor_reconstruction/7215643/1

  Dataset

• LuxHMM: DNA methylation analysis with genome segmentation via hidden Markov model

  Malonzo, M. H. (Creator) & Lähdesmäki, H. (Creator), figshare, 13 Apr 2023

  DOI: 10.6084/m9.figshare.c.6584741, https://springernature.figshare.com/collections/LuxHMM_DNA_methylation_analysis_with_genome_segmentation_via_hidden_Markov_model/6584741

  Dataset

• Probabilistic modeling methods for cell-free DNA methylation based cancer classification

  Halla-aho, V. (Creator) & Lähdesmäki, H. (Contributor), figshare, 1 Jan 2022

  DOI: 10.6084/m9.figshare.c.5931075.v1, https://springernature.figshare.com/collections/Probabilistic_modeling_methods_for_cell-free_DNA_methylation_based_cancer_classification/5931075/1 and 4 more links, https://springernature.figshare.com/articles/dataset/Additional_file_2_of_Probabilistic_modeling_methods_for_cell-free_DNA_methylation_based_cancer_classification/19518510/1, https://springernature.figshare.com/articles/dataset/Additional_file_3_of_Probabilistic_modeling_methods_for_cell-free_DNA_methylation_based_cancer_classification/19518513/1, https://springernature.figshare.com/articles/dataset/Additional_file_4_of_Probabilistic_modeling_methods_for_cell-free_DNA_methylation_based_cancer_classification/19518516/1, https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_Probabilistic_modeling_methods_for_cell-free_DNA_methylation_based_cancer_classification/19518507/1 (show fewer)

  Dataset

• Human-in-the-loop assisted de novo molecular design

  Sundin, I. (Creator), Voronov, A. (Creator), Xiao, H. (Creator), Papadopoulos, K. (Creator), Bjerrum, E. J. (Creator), Heinonen, M. (Creator), Patronov, A. (Creator), Kaski, S. (Creator) & Engkvist, O. (Creator), figshare, 13 Aug 2024

  DOI: 10.6084/m9.figshare.c.6582620, https://springernature.figshare.com/collections/Human-in-the-loop_assisted_de_novo_molecular_design/6582620

  Dataset

• Identification of multiplicatively acting modulatory mutational signatures in cancer

  Kičiatovas, D. (Creator), Guo, Q. (Creator), Kailas, M. (Creator), Pesonen, H. (Creator), Corander, J. (Creator), Kaski, S. (Creator), Pitkänen, E. (Creator) & Mustonen, V. (Creator), figshare, 13 Apr 2023

  DOI: 10.6084/m9.figshare.c.6579047, https://springernature.figshare.com/collections/Identification_of_multiplicatively_acting_modulatory_mutational_signatures_in_cancer/6579047

  Dataset

• Permutation-based significance analysis reduces the type 1 error rate in bisulfite sequencing data analysis of human umbilical cord blood samples

  Laajala, E. (Creator), Halla-aho, V. (Creator), Grönroos, T. (Creator), Kalim, U. U. (Creator), Vähä-Mäkilä, M. (Creator), Nurmio, M. (Creator), Kallionpää, H. (Creator), Lietzén, N. (Creator), Mykkänen, J. (Creator), Rasool, O. (Creator), Toppari, J. (Creator), University, M. (Creator), Knip, M. (Creator), Lund, R. (Creator), Lahesmaa, R. (Creator) & Lähdesmäki, H. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.19311109.v2, https://tandf.figshare.com/articles/dataset/Permutation-based_significance_analysis_reduces_the_type_1_error_rate_in_bisulfite_sequencing_data_analysis_of_human_umbilical_cord_blood_samples/19311109/1

  Dataset

• Additional file 2 of LuxHMM: DNA methylation analysis with genome segmentation via hidden Markov model

  Malonzo, M. H. (Creator) & Lähdesmäki, H. (Creator), figshare, 13 Apr 2023

  DOI: 10.6084/m9.figshare.22610645.v1, https://springernature.figshare.com/articles/dataset/Additional_file_2_of_LuxHMM_DNA_methylation_analysis_with_genome_segmentation_via_hidden_Markov_model/22610645/1

  Dataset

• Supplementary material from "Modelling methicillin-resistant Staphylococcus aureus decolonization: interactions between body sites and the impact of site-specific clearance"

  Poyraz, O. (Creator), Sater, M. R. A. (Creator), Miller, L. G. (Creator), McKinnell, J. A. (Creator), Huang, S. S. (Creator), Grad, Y. H. (Creator) & Marttinen, P. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.c.6016851.v2, https://rs.figshare.com/collections/Supplementary_material_from_Modelling_methicillin-resistant_i_Staphylococcus_aureus_i_decolonization_interactions_between_body_sites_and_the_impact_of_site-specific_clearance_/6016851/2 and 3 more links, https://doi.org/10.6084/m9.figshare.c.6016851.v1, https://rs.figshare.com/collections/Supplementary_material_from_Modelling_methicillin-resistant_i_Staphylococcus_aureus_i_decolonization_interactions_between_body_sites_and_the_impact_of_site-specific_clearance_/6016851, https://rs.figshare.com/collections/Supplementary_material_from_Modelling_methicillin-resistant_i_Staphylococcus_aureus_i_decolonization_interactions_between_body_sites_and_the_impact_of_site-specific_clearance_/6016851/1 (show fewer)

  Dataset

• LetterSampo correspSearch data publication

  Hyvönen, E. (Creator), Leskinen, P. (Creator) & Tuominen, J. (Creator), Zenodo, 2022

  DOI: 10.5281/zenodo.5972315

  Dataset

• MeMAD data for automatic cross-lingual retrieval experiments

  Sulubacak, U. (Creator) & Laaksonen, J. (Creator), Zenodo, 2021

  DOI: 10.5281/zenodo.4570071, https://zenodo.org/record/4570072

  Dataset

• Additional file 2 of Probabilistic modeling methods for cell-free DNA methylation based cancer classification

  Halla-aho, V. (Creator) & Lähdesmäki, H. (Creator), figshare, 5 Apr 2022

  DOI: 10.6084/m9.figshare.19518510, https://springernature.figshare.com/articles/dataset/Additional_file_2_of_Probabilistic_modeling_methods_for_cell-free_DNA_methylation_based_cancer_classification/19518510

  Dataset

• Modeling binding specificities of transcription factor pairs with random forests

  Antikainen, A. A. (Creator), Heinonen, M. (Creator) & Lähdesmäki, H. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.c.6031779.v1, https://springernature.figshare.com/collections/Modeling_binding_specificities_of_transcription_factor_pairs_with_random_forests/6031779/1 and 2 more links, https://doi.org/10.6084/m9.figshare.20003418.v1, https://doi.org/10.6084/m9.figshare.20003421.v1 (show fewer)

  Dataset

• Connectomes of phase-synchronization generated by Wilson-Cowan network model

  Williams, N. (Contributor), Toselli, B. (Creator), Siebenhühner, F. (Contributor), Palva, S. (Creator), Arnulfo, G. (Creator), Kaski, S. (Contributor) & Palva, M. (Contributor), Mendeley Data, 6 Aug 2021

  DOI: 10.17632/bgs7w9z24h.2, https://data.mendeley.com/datasets/bgs7w9z24h

  Dataset

• Pioneer Networks: Progressively Growing Generative Autoencoder

  Ari, H. (Creator), Solin, A. (Creator) & Kannala, J. (Creator), Zenodo, 2018

  DOI: 10.5281/zenodo.1455187, https://zenodo.org/api/records/1455188

  Dataset

• Additional file 2 of Modeling binding specificities of transcription factor pairs with random forests

  Antikainen, A. A. (Creator), Heinonen, M. (Creator) & Lähdesmäki, H. (Creator), figshare, 6 Jun 2022

  DOI: 10.6084/m9.figshare.20003421, https://springernature.figshare.com/articles/dataset/Additional_file_2_of_Modeling_binding_specificities_of_transcription_factor_pairs_with_random_forests/20003421

  Dataset

• Communication now and then: analyzing the Republic of Letters as a communication network

  Ureña-Carrion, J. (Creator), Leskinen, P. (Creator), Tuominen, J. (Creator), van den Heuvel, C. (Contributor), Hyvönen, E. (Creator) & Kivelä, M. (Creator), figshare, 1 Jan 2022

  DOI: 10.6084/m9.figshare.c.5990067.v1, https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_Communication_now_and_then_analyzing_the_Republic_of_Letters_as_a_communication_network/19745481 and 3 more links, https://doi.org/10.6084/m9.figshare.19745481.v1, https://springernature.figshare.com/collections/Communication_now_and_then_analyzing_the_Republic_of_Letters_as_a_communication_network/5990067/1, https://springernature.figshare.com/collections/Communication_now_and_then_analyzing_the_Republic_of_Letters_as_a_communication_network/5990067 (show fewer)

  Dataset