Physical Review E

Research outputs

  1. 2016
  2. Published

    Multiscale modeling of dislocation-precipitate interactions in Fe: From molecular dynamics to discrete dislocations

    Lehtinen, A., Granberg, F., Laurson, L., Nordlund, K. & Alava, M., 21 Jan 2016, In : Physical Review E. 93, 1, p. 1-9 013309.

    Research output: Contribution to journalArticleScientificpeer-review

  3. Published

    Entropy production of a Brownian ellipsoid in the overdamped limit

    Marino, R., Eichhorn, R. & Aurell, E., 19 Jan 2016, In : Physical Review E. 93, 1, p. 1-15 012132.

    Research output: Contribution to journalArticleScientificpeer-review

  4. Published

    Chaperone-assisted translocation of flexible polymers in three dimensions

    Suhonen, P. M. & Linna, R. P., 13 Jan 2016, In : Physical Review E. 93, 1, p. 1-10 012406.

    Research output: Contribution to journalArticleScientificpeer-review

  5. Published

    Interaction modes between asymmetrically and oppositely charged rods

    Antila, H. S., Van Tassel, P. R. & Sammalkorpi, M., 2016, In : Physical Review E. 93, 2, 022602.

    Research output: Contribution to journalArticleScientificpeer-review

  6. 2015
  7. Published

    Anchored boundary conditions for locally isostatic networks

    Theran, L., Nixon, A., Ross, E., Sadjadi, M., Servatius, B. & Thorpe, M. F., 30 Nov 2015, In : Physical Review E. 92, 5, 9 p., 053306.

    Research output: Contribution to journalArticleScientificpeer-review

  8. Published

    Correlated bursts and the role of memory range

    Jo, H. H., Perotti, J. I., Kaski, K. & Kertész, J., 20 Aug 2015, In : Physical Review E. 92, 2, 022814.

    Research output: Contribution to journalArticleScientificpeer-review

  9. Published

    Entropy production in a non-Markovian environment

    Kutvonen, A., Ala-Nissila, T. & Pekola, J., 6 Jul 2015, In : Physical Review E. 92, 1, p. 1-7 7 p., 012107.

    Research output: Contribution to journalArticleScientificpeer-review

  10. Published

    Dephasing and dissipation in qubit thermodynamics

    Pekola, J. P., Masuyama, Y., Nakamura, Y., Bergli, J. & Galperin, Y. M., 8 Jun 2015, In : Physical Review E. 91, 6, p. 1-8 8 p., 062109.

    Research output: Contribution to journalArticleScientificpeer-review

  11. Published

    Fluctuation relations for driven coupled classical two-level systems with incomplete measurements

    Borrelli, M., Koski, J., Maniscalco, S. & Pekola, J. P., 28 Jan 2015, In : Physical Review E. 91, 1, p. 1-8 8 p., 012145.

    Research output: Contribution to journalArticleScientificpeer-review

  12. Published

    Benchmark model to assess community structure in evolving networks

    Granell, C., Darst, R. K., Arenas, A., Fortunato, S. & Gómez, S., 2015, In : Physical Review E. 92, 1, p. 1-8 012805.

    Research output: Contribution to journalArticleScientificpeer-review

  13. Published

    Crossover behavior in interface depinning

    Chen, Y. J., Zapperi, S. & Sethna, J. P., 2015, In : Physical Review E. 92, 2

    Research output: Contribution to journalArticleScientificpeer-review

  14. Published

    Dynamic hysteresis in the rheology of complex fluids

    Puisto, A., Mohtaschemi, M., Alava, MJ. & Illa, X., 2015, In : Physical Review E. 91, 4, p. 1-8 042314.

    Research output: Contribution to journalArticleScientificpeer-review

  15. Published

    Dynamic message-passing approach for kinetic spin models with reversible dynamics

    Del Ferraro, G. & Aurell, E., 2015, In : Physical Review E. 92, 1, p. 1-7 010102.

    Research output: Contribution to journalArticleScientificpeer-review

  16. Published

    Fluctuations of work in nearly adiabatically driven open quantum systems

    Suomela, S., Salmilehto, J., Savenko, I., Ala-Nissila, T. & Möttönen, M., 2015, In : Physical Review E. 91, 2, p. 1-13 022126.

    Research output: Contribution to journalArticleScientificpeer-review

  17. Published

    Friction control with nematic lubricants via external fields

    Manzato, C., Foster, A. S., Alava, M. J. & Laurson, L., 2015, In : Physical Review E. 91, 1, p. 1-6 6 p., 012504.

    Research output: Contribution to journalArticleScientificpeer-review

  18. Published

    Local search methods based on variable focusing for random K-satisfiability

    Lemoy, R., Alava, M. & Aurell, E., 2015, In : Physical Review E. 91, 1, p. 1-6 013305.

    Research output: Contribution to journalArticleScientificpeer-review

  19. Published

    Network-based model of the growth of termite nests

    Eom, Y-H., Perna, A., Fortunato, S., Darrouzet, E., Theraulaz, G. & Jost, C., 2015, In : Physical Review E. 92, 6

    Research output: Contribution to journalArticleScientificpeer-review

  20. Published

    Polymer ejection from strong spherical confinement

    Piili, J. & Linna, R. P., 2015, In : Physical Review E. 92, 6, p. 1-6 062715.

    Research output: Contribution to journalArticleScientificpeer-review

  21. Published

    Spatial game in cellular automaton evacuation model

    von Schantz, A. & Ehtamo, H., 2015, In : Physical Review E. 92, 5, p. 1-13 052806.

    Research output: Contribution to journalArticleScientificpeer-review

  22. 2014
  23. Published

    Intermittency and dynamical Lee-Yang zeros of open quantum systems

    Hickey, J. M., Flindt, C. & Garrahan, J. P., 19 Dec 2014, In : Physical Review E. 90, 6, p. 1-10 10 p., 062128.

    Research output: Contribution to journalArticleScientificpeer-review

  24. Published

    Multilayer weighted social network model

    Murase, Y., Török, J., Jo, H. H., Kaski, K. & Kertész, J., 17 Nov 2014, In : Physical Review E. 90, 5, p. 1-8 052810.

    Research output: Contribution to journalArticleScientificpeer-review

  25. Published

    Zipf's law in city size from a resource utilization model

    Ghosh, A., Chatterjee, A., Chakrabarti, A. S. & Chakrabarti, B. K., 27 Oct 2014, In : Physical Review E. 90, 4, 7 p., 042815.

    Research output: Contribution to journalArticleScientificpeer-review

  26. Published

    Generalized friendship paradox in networks with tunable degree-attribute correlation

    Jo, H. H. & Eom, Y. H., 21 Aug 2014, In : Physical Review E. 90, 2, p. 1-6 022809.

    Research output: Contribution to journalArticleScientificpeer-review

  27. Published

    Imperfections in a two-dimensional hierarchical structure

    Rayneau-Kirkhope, D., Mao, Y. & Farr, R., 12 Feb 2014, In : Physical Review E. 89, 2, p. 1-11 023201.

    Research output: Contribution to journalArticleScientificpeer-review

  28. Published

    Gray solitons on the surface of water

    Chabchoub, A., Kimmoun, O., Branger, H., Kharif, C., Hoffmann, N., Onorato, M. & Akhmediev, N., 10 Jan 2014, In : Physical Review E. 89, 1, 011002.

    Research output: Contribution to journalArticleScientificpeer-review

  29. Published

    Boundary lubrication with a liquid crystal monolayer

    Chen, W., Kulju, S., Foster, A. S., Alava, M. J. & Laurson, L., 2014, In : Physical Review E. 90, 1, p. 1-9 012404.

    Research output: Contribution to journalArticleScientificpeer-review

  30. Published

    Community detection in networks: Structural communities versus ground truth

    Hric, D., Darst, R. K. & Fortunato, S., 2014, In : Physical Review E. 90, 6, p. 1-19 19 p., 062805.

    Research output: Contribution to journalArticleScientificpeer-review

  31. Published

    Consistent inference of a general model using the pseudolikelihood method

    Mozeika, A., Dikmen, O. & Piili, J., 2014, In : Physical Review E. 90, 1, p. 1-3 010101.

    Research output: Contribution to journalArticleScientificpeer-review

  32. Published

    Criteria for minimal model of driven polymer translocation

    Suhonen, P., Kaski, K. & Linna, R., 2014, In : Physical Review E. 90, 4, p. 1-8 042702.

    Research output: Contribution to journalArticleScientificpeer-review

  33. Published

    Damage accumulation in quasi-brittle fracture

    Manzato, C., Alava, M. J. & Zapperi, S., 2014, In : Physical Review E. 90, 1, p. 1-5 012408.

    Research output: Contribution to journalArticleScientificpeer-review

  34. Published

    Dynamics of polymer ejection from capsid

    Linna, R., Moisio, J., Suhonen, P. & Kaski, K., 2014, In : Physical Review E. 89, 5, p. 1-9 052702.

    Research output: Contribution to journalArticleScientificpeer-review

  35. Published

    Effects of temporal correlations on cascades: Threshold models on temporal networks

    Backlund, V-P., Saramäki, J. & Pan, R. K., 2014, In : Physical Review E. 89, 6, p. 1-8 062815.

    Research output: Contribution to journalArticleScientificpeer-review

  36. Published

    Improving the performance of algorithms to find communities in networks

    Darst, R. K., Nussinov, Z. & Fortunato, S., 2014, In : Physical Review E. 89, 3, p. 1-7 032809.

    Research output: Contribution to journalArticleScientificpeer-review

  37. Published

    Lindblad-equation approach for the full counting statistics of work and heat in driven quantum systems

    Silaev, M., Heikkila, T. T. & Virtanen, P., 2014, In : Physical Review E. 90, 2, p. 022103

    Research output: Contribution to journalArticleScientificpeer-review

  38. Published

    Mobility-dependent selection of competing strategy associations

    Dobrinevski, A., Alava, M., Reichenbach, T. & Frey, E., 2014, In : Physical Review E. 89, 1, p. 1-9 012721.

    Research output: Contribution to journalArticleScientificpeer-review

  39. Published

    Phase-field-crystal models and mechanical equilibrium

    Heinonen, V., Achim, C. V., Elder, K., Buyuddagli, S. & Ala-Nissila, T., 2014, In : Physical Review E. 89, 3, p. 1-11 032411.

    Research output: Contribution to journalArticleScientificpeer-review

  40. Published

    Quantum driving and work

    Salmilehto, J., Solinas, P. & Möttönen, M., 2014, In : Physical Review E. 89, 5, p. 1-7 052128.

    Research output: Contribution to journalArticleScientificpeer-review

  41. Published

    Triadic closure as a basic generating mechanism of communities in complex networks

    Bianconi, G., Darst, R. K., Iacovacci, J. & Fortunato, S., 2014, In : Physical Review E. 90, 4, p. 1-10 042806.

    Research output: Contribution to journalArticleScientificpeer-review

  42. 2013
  43. Published

    Evolution of grain contacts in a granular sample under creep and stress relaxation

    Miksic, A. & Alava, M., 27 Sep 2013, In : Physical Review E. 88, 3, p. 1-7 7 p., 032207.

    Research output: Contribution to journalArticleScientificpeer-review

  44. Published

    Super-rogue waves in simulations based on weakly nonlinear and fully nonlinear hydrodynamic equations

    Slunyaev, A., Pelinovsky, E., Sergeeva, A., Chabchoub, A., Hoffmann, N., Onorato, M. & Akhmediev, N., 19 Jul 2013, In : Physical Review E. 88, 1, 012909.

    Research output: Contribution to journalArticleScientificpeer-review

  45. Published

    Trajectory phase transitions and dynamical Lee-Yang zeros of the Glauber-Ising chain

    Hickey, J. M., Flindt, C. & Garrahan, J. P., 16 Jul 2013, In : Physical Review E. 88, 1, p. 1-10 10 p., 012119.

    Research output: Contribution to journalArticleScientificpeer-review

  46. Published

    Optimization of fractal space frames under gentle compressive load

    Rayneau-Kirkhope, D., Mao, Y. & Farr, R., 26 Jun 2013, In : Physical Review E. 87, 6, 063204.

    Research output: Contribution to journalArticleScientificpeer-review

  47. Published

    Emergent patterns of localized damage as a precursor to catastrophic failure in a random fuse network

    Lennartz-Sassinek, S., Zaiser, M., Main, I. G., Manzato, C. & Zapperi, S., 18 Apr 2013, In : Physical Review E. 87, 4, 042811.

    Research output: Contribution to journalArticleScientificpeer-review

  48. Published

    Transient shear banding in time-dependent fluids

    Illa, X., Puisto, A., Lehtinen, A., Mohtaschemi, M. & Alava, M. J., 22 Feb 2013, In : Physical Review E. 87, 2, p. 1-5 022307.

    Research output: Contribution to journalArticleScientificpeer-review

  49. Published

    Collective dynamics of pedestrians interacting with attractions

    Kwak, J., Jo, H-H., Luttinen, T. & Kosonen, I., 2013, In : Physical Review E. 88, 6, p. 1-6 062810.

    Research output: Contribution to journalArticleScientificpeer-review

  50. Published

    Contextual analysis framework for bursty dynamics

    Jo, H-H., Pan, R. K., Perotti, J. I. & Kaski, K., 2013, In : Physical Review E. 87, 6

    Research output: Contribution to journalArticleScientificpeer-review

  51. Published

    Improved contact prediction in proteins: Using pseudolikelihoods to infer Potts models

    Ekeberg, M., Lövkvist, C., Lan, Y., Weigt, M. & Aurell, E., 2013, In : Physical Review E. 87

    Research output: Contribution to journalArticleScientificpeer-review

  52. Published

    Infinite-dimensional Bayesian filtering for detection of quasiperiodic phenomena in spatiotemporal data

    Solin, A. & Särkkä, S., 2013, In : Physical Review E. 88, 5

    Research output: Contribution to journalArticleScientificpeer-review

  53. Published

    Information flow and optimal protocol for a Maxwell-demon single-electron pump

    Bergli, J., Galperin, Y. M. & Kopnin, N. B., 2013, In : Physical Review E. 88, 0, p. 062139

    Research output: Contribution to journalArticleScientificpeer-review

  54. Published

    Microscopic formulation of non-local electrostatics in polar liquids embedding polarizable ions

    Buyukdagli, S. & Ala-Nissilä, T., 2013, In : Physical Review E. 87, 6, p. 1-14 063201.

    Research output: Contribution to journalArticleScientificpeer-review

ID: 362041