Physical Review E

Research outputs

  1. 2018
  2. Published

    Irreversible transition of amorphous and polycrystalline colloidal solids under cyclic deformation

    Jana, P. K., Alava, M. J. & Zapperi, S., 14 Dec 2018, In : Physical Review E. 98, 6, p. 1-9 062607.

    Research output: Contribution to journalArticleScientificpeer-review

  3. Published

    Optical admittance method for light-matter interaction in lossy planar resonators

    Kivisaari, P., Partanen, M. & Oksanen, J., 4 Dec 2018, In : Physical Review E. 98, 6, p. 1-13 063304.

    Research output: Contribution to journalArticleScientificpeer-review

  4. Published

    Correlation-compressed direct-coupling analysis

    Gao, C. Y., Zhou, H. J. & Aurell, E., 11 Sep 2018, In : Physical Review E. 98, 3, p. 1-15 032407.

    Research output: Contribution to journalArticleScientificpeer-review

  5. Published

    Hierarchical burst model for complex bursty dynamics

    Lee, B. H., Jung, W. S. & Jo, H. H., 17 Aug 2018, In : Physical Review E. 98, 2, p. 1-7 022316.

    Research output: Contribution to journalArticleScientificpeer-review

  6. Published

    Coarsening and mechanics in the bubble model for wet foams

    Khakalo, K., Baumgarten, K., Tighe, B. P. & Puisto, A., 19 Jul 2018, In : Physical Review E. 98, 1, p. 1-9 012607.

    Research output: Contribution to journalArticleScientificpeer-review

  7. Published

    Dynamics of driven translocation of semiflexible polymers

    Suhonen, P. M. & Linna, R. P., 20 Jun 2018, In : Physical Review E. 97, 6, 062413.

    Research output: Contribution to journalArticleScientificpeer-review

  8. Published

    Enhanced polymer capture speed and extended translocation time in pressure-solvation traps

    Buyukdagli, S., 11 Jun 2018, In : Physical Review E. 97, 6, p. 1-13 062406.

    Research output: Contribution to journalArticleScientificpeer-review

  9. Published

    Characteristic functions of quantum heat with baths at different temperatures

    Aurell, E., 7 Jun 2018, In : Physical Review E. 97, 6, p. 1-9 062117.

    Research output: Contribution to journalArticleScientificpeer-review

  10. Published

    Inverse finite-size scaling for high-dimensional significance analysis

    Xu, Y., Puranen, S., Corander, J. & Kabashima, Y., 6 Jun 2018, In : Physical Review E. 97, 6, p. 1-9 062112.

    Research output: Contribution to journalArticleScientificpeer-review

  11. Published

    Moving magnets in a micromagnetic finite-difference framework

    Rissanen, I. & Laurson, L., 2 May 2018, In : Physical Review E. 97, 5, p. 1-8 053301.

    Research output: Contribution to journalArticleScientificpeer-review

  12. Published

    Unified picture of strong-coupling stochastic thermodynamics and time reversals

    Aurell, E., 9 Apr 2018, In : Physical Review E. 97, 4, p. 1-10 042112.

    Research output: Contribution to journalArticleScientificpeer-review

  13. Published

    Limits of the memory coefficient in measuring correlated bursts

    Jo, H. H. & Hiraoka, T., 16 Mar 2018, In : Physical Review E. 97, 3, p. 1-8 032121.

    Research output: Contribution to journalArticleScientificpeer-review

  14. Published

    Lee-Yang zeros and large-deviation statistics of a molecular zipper

    Deger, A., Brandner, K. & Flindt, C., 12 Jan 2018, In : Physical Review E. 97, 1, p. 1-12 012115.

    Research output: Contribution to journalArticleScientificpeer-review

  15. 2017
  16. Published

    Modeling correlated bursts by the bursty-get-burstier mechanism

    Jo, H-H., 18 Dec 2017, In : Physical Review E. 96, 6, p. 1-7 7 p., 062131.

    Research output: Contribution to journalArticleScientificpeer-review

  17. Published

    Chaos and unpredictability in evolution of cooperation in continuous time

    You, T., Kwon, M., Jo, H-H., Jung, W-S. & Baek, S. K., 15 Dec 2017, In : Physical Review E. 96, 6, p. 1-18 8 p., 062310.

    Research output: Contribution to journalArticleScientificpeer-review

  18. Published

    Quantification of tension to explain bias dependence of driven polymer translocation dynamics

    Suhonen, P. M., Piili, J. & Linna, R. P., 6 Dec 2017, In : Physical Review E. 96, 6, p. 1-15 062401.

    Research output: Contribution to journalArticleScientificpeer-review

  19. Published

    Rigidity-induced scale invariance in polymer ejection from capsid

    Linna, R. P., Suhonen, P. M. & Piili, J., 1 Nov 2017, In : Physical Review E. 96, 5, p. 1-10 052402.

    Research output: Contribution to journalArticleScientificpeer-review

  20. Published

    Steady diffusion in a drift field: A comparison of large-deviation techniques and multiple-scale analysis

    Aurell, E. & Bo, S., 27 Sep 2017, In : Physical Review E. 96, 3, p. 1-12 032140.

    Research output: Contribution to journalArticleScientificpeer-review

  21. Published

    Nonconservative higher-order hydrodynamic modulation instability

    Kimmoun, O., Hsu, H. C., Kibler, B. & Chabchoub, A., Aug 2017, In : Physical Review E. 96, 2, p. 1-6 6 p., 022219.

    Research output: Contribution to journalArticleScientificpeer-review

  22. Published

    Uniform description of polymer ejection dynamics from capsid with and without hydrodynamics

    Piili, J., Suhonen, P. M. & Linna, R. P., 26 May 2017, In : Physical Review E. 95, 5, p. 1-12 12 p., 052418.

    Research output: Contribution to journalArticleScientificpeer-review

  23. Published

    Cavity master equation for the continuous time dynamics of discrete-spin models

    Aurell, E., Del Ferraro, G., Dominguez, E. & Mulet, R., 12 May 2017, In : Physical Review E. 95, 5, p. 1-14 14 p., 052119.

    Research output: Contribution to journalArticleScientificpeer-review

  24. Published

    Start-up inertia as an origin for heterogeneous flow

    Korhonen, M., Mohtaschemi, M., Puisto, A., Illa Tortos, X. & Alava, M. J., 23 Feb 2017, In : Physical Review E. 95, 2, p. 1-6 022608.

    Research output: Contribution to journalArticleScientificpeer-review

  25. Published

    Jamming transitions induced by an attraction in pedestrian flow

    Kwak, J., Jo, H-H., Luttinen, T. & Kosonen, I., 2017, In : Physical Review E. 96, 2, p. 1-14 14 p., 022319.

    Research output: Contribution to journalArticleScientificpeer-review

  26. 2016
  27. Published

    Fluctuation relation for qubit calorimetry

    Kupiainen, A., Muratore-Ginanneschi, P., Pekola, J. & Schwieger, K., 20 Dec 2016, In : Physical Review E. 94, 6, p. 1-6 062127.

    Research output: Contribution to journalArticleScientificpeer-review

  28. Published

    Calorimetric measurement of work for a driven harmonic oscillator

    Sampaio, R., Suomela, S. & Ala-Nissilä, T., 15 Dec 2016, In : Physical Review E. 94, 6, p. 1-9 062122.

    Research output: Contribution to journalArticleScientificpeer-review

  29. Published

    What Big Data tells: Sampling the social network by communication channels

    Török, J., Murase, Y., Jo, H. H., Kertész, J. & Kaski, K., 29 Nov 2016, In : Physical Review E. 94, 5, p. 1-11 052319.

    Research output: Contribution to journalArticleScientificpeer-review

  30. Published

    Comparison between quantum jumps and master equation in the presence of a finite environment

    Suomela, S., Sampaio, R. & Ala-Nissilä, T., 30 Sep 2016, In : Physical Review E. 94, 3, p. 1-9 032138.

    Research output: Contribution to journalArticleScientificpeer-review

  31. Published

    Measuring burstiness for finite event sequences

    Kim, E-K. & Jo, H-H., 15 Sep 2016, In : Physical Review E. 94, 3, p. 1-7 7 p., 032311.

    Research output: Contribution to journalArticleScientificpeer-review

  32. Published

    Driven polymer translocation in good and bad solvent: Effects of hydrodynamics and tension propagation

    Moisio, J. E., Piili, J. & Linna, R. P., 25 Aug 2016, In : Physical Review E. 94, 2, p. 1-10 022501.

    Research output: Contribution to journalArticleScientificpeer-review

  33. Published

    Energy fluctuations of a finite free-electron Fermi gas

    Pekola, J. P., Muratore-Ginanneschi, P., Kupiainen, A. & Galperin, Y. M., 18 Aug 2016, In : Physical Review E. 94, 2, p. 1-4 022123.

    Research output: Contribution to journalArticleScientificpeer-review

  34. Published

    Predicting sample lifetimes in creep fracture of heterogeneous materials

    Koivisto, J., Ovaska, M., Miksic, A., Laurson, L. & Alava, M. J., 8 Aug 2016, In : Physical Review E. 94, 2, p. 1-6 023002.

    Research output: Contribution to journalArticleScientificpeer-review

  35. Published

    Advective-diffusive motion on large scales from small-scale dynamics with an internal symmetry

    Marino, R. & Aurell, E., 30 Jun 2016, In : Physical Review E. 93, 6, p. 1-15 062147.

    Research output: Contribution to journalArticleScientificpeer-review

  36. Published

    Periodic thermodynamics of open quantum systems

    Brandner, K. & Seifert, U., 22 Jun 2016, In : Physical Review E. 93, 6, p. 1-20 062134.

    Research output: Contribution to journalArticleScientificpeer-review

  37. Published

    Eigenvector dynamics under perturbation of modular networks

    Sarkar, S., Chawla, S., Robinson, P. A. & Fortunato, S., 20 Jun 2016, In : Physical Review E. 93, 6, p. 1-7 062312.

    Research output: Contribution to journalArticleScientificpeer-review

  38. Published

    Quantum jump model for a system with a finite-size environment

    Suomela, S., Kutvonen, A. & Ala-Nissilä, T., 3 Jun 2016, In : Physical Review E. 93, 6, 7 p., 062106.

    Research output: Contribution to journalArticleScientificpeer-review

  39. Published

    Spectral mapping of heat transfer mechanisms at liquid-solid interfaces

    Sääskilahti, K., Oksanen, J., Tulkki, J. & Volz, S., 24 May 2016, In : Physical Review E. 93, 5, p. 1-8 052141.

    Research output: Contribution to journalArticleScientificpeer-review

  40. Published

    Collective decision making with a mix of majority and minority seekers

    Holme, P. & Jo, H. H., 23 May 2016, In : Physical Review E. 93, 5, p. 1-7 052308.

    Research output: Contribution to journalArticleScientificpeer-review

  41. Published

    Long-wavelength properties of phase-field-crystal models with second-order dynamics

    Heinonen, V., Achim, C. V. & Ala-Nissilä, T., 9 May 2016, In : Physical Review E. 93, 5, p. 1-9 053002.

    Research output: Contribution to journalArticleScientificpeer-review

  42. Published

    Optimal performance of periodically driven, stochastic heat engines under limited control

    Bauer, M., Brandner, K. & Seifert, U., 13 Apr 2016, In : Physical Review E. 93, 4, p. 1-14 042112.

    Research output: Contribution to journalArticleScientificpeer-review

  43. Published

    Thermodynamics of information exchange between two coupled quantum dots

    Kutvonen, A., Sagawa, T. & Ala-Nissilä, T., 28 Mar 2016, In : Physical Review E. 93, 3, p. 1-7 032147.

    Research output: Contribution to journalArticleScientificpeer-review

  44. Published

    Multiscale modeling of dislocation-precipitate interactions in Fe: From molecular dynamics to discrete dislocations

    Lehtinen, A., Granberg, F., Laurson, L., Nordlund, K. & Alava, M., 21 Jan 2016, In : Physical Review E. 93, 1, p. 1-9 013309.

    Research output: Contribution to journalArticleScientificpeer-review

  45. Published

    Entropy production of a Brownian ellipsoid in the overdamped limit

    Marino, R., Eichhorn, R. & Aurell, E., 19 Jan 2016, In : Physical Review E. 93, 1, p. 1-15 012132.

    Research output: Contribution to journalArticleScientificpeer-review

  46. Published

    Chaperone-assisted translocation of flexible polymers in three dimensions

    Suhonen, P. M. & Linna, R. P., 13 Jan 2016, In : Physical Review E. 93, 1, p. 1-10 012406.

    Research output: Contribution to journalArticleScientificpeer-review

  47. Published

    Interaction modes between asymmetrically and oppositely charged rods

    Antila, H. S., Van Tassel, P. R. & Sammalkorpi, M., 2016, In : Physical Review E. 93, 2, 022602.

    Research output: Contribution to journalArticleScientificpeer-review

  48. 2015
  49. Published

    Anchored boundary conditions for locally isostatic networks

    Theran, L., Nixon, A., Ross, E., Sadjadi, M., Servatius, B. & Thorpe, M. F., 30 Nov 2015, In : Physical Review E. 92, 5, 9 p., 053306.

    Research output: Contribution to journalArticleScientificpeer-review

  50. Published

    Correlated bursts and the role of memory range

    Jo, H. H., Perotti, J. I., Kaski, K. & Kertész, J., 20 Aug 2015, In : Physical Review E. 92, 2, 022814.

    Research output: Contribution to journalArticleScientificpeer-review

  51. Published

    Entropy production in a non-Markovian environment

    Kutvonen, A., Ala-Nissila, T. & Pekola, J., 6 Jul 2015, In : Physical Review E. 92, 1, p. 1-7 7 p., 012107.

    Research output: Contribution to journalArticleScientificpeer-review

  52. Published

    Dephasing and dissipation in qubit thermodynamics

    Pekola, J. P., Masuyama, Y., Nakamura, Y., Bergli, J. & Galperin, Y. M., 8 Jun 2015, In : Physical Review E. 91, 6, p. 1-8 8 p., 062109.

    Research output: Contribution to journalArticleScientificpeer-review

  53. Published

    Fluctuation relations for driven coupled classical two-level systems with incomplete measurements

    Borrelli, M., Koski, J., Maniscalco, S. & Pekola, J. P., 28 Jan 2015, In : Physical Review E. 91, 1, p. 1-8 8 p., 012145.

    Research output: Contribution to journalArticleScientificpeer-review

  54. Published

    Benchmark model to assess community structure in evolving networks

    Granell, C., Darst, R. K., Arenas, A., Fortunato, S. & Gómez, S., 2015, In : Physical Review E. 92, 1, p. 1-8 012805.

    Research output: Contribution to journalArticleScientificpeer-review

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