Research output per year
Research output per year
Description
This in an open scientific collaboration project to understand the atomistic resolution structures of lipid bilayers. The project is progressed through the comments in this blog and using the GitHub organization. The main results are also published in traditional peer reviewed scientific journals. The authorship in these publications is based on the self-assesment of the contributors, as defined in the beginning of the project.
http://nmrlipids.blogspot.com/
Project website
https://github.com/NMRLipids
Github - code
https://zenodo.org/collection/user-nmrlipids
Zenodo community - data
http://nmrlipids.blogspot.com/
Project website
https://github.com/NMRLipids
Github - code
https://zenodo.org/collection/user-nmrlipids
Zenodo community - data
| Date made available | 2015 |
|---|---|
| Publisher | Zenodo |
Dataset Licences
- Unspecified
Research output
- 4 Article
-
Headgroup Structure and Cation Binding in Phosphatidylserine Lipid Bilayers
Antila, H., Buslaev, P., Favela-Rosales, F., Ferreira, T. M., Gushchin, I., Javanainen, M., Kav, B., Madsen, J. J., Melcr, J., Miettinen, M. S., Määttä, J., Nencini, R., Ollila, O. H. S. & Piggot, T. J., 1 Jan 2019, In: Journal of Physical Chemistry B. 123, 43, p. 9066-9079Research output: Contribution to journal › Article › Scientific › peer-review
Open Access41 Citations (Scopus) -
Atomistic resolution structure and dynamics of lipid bilayers in simulations and experiments
Ollila, S. & Pabst, G., 1 Oct 2016, In: Biochimica et Biophysica Acta - Biomembranes. 1858, 10, p. 2512-2528 17 p.Research output: Contribution to journal › Article › Scientific › peer-review
71 Citations (Scopus) -
Molecular electrometer and binding of cations to phospholipid bilayers
Catte, A., Girych, M., Javanainen, M., Loison, C., Melcr, J., Miettinen, M. S., Monticelli, L., Määttä, J., Oganesyan, V. S., Ollila, S., Tynkkynen, J. & Vilov, S., 2016, In: Physical Chemistry Chemical Physics. 18, 47, p. 32560-32569 10 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
Datasets
-
MD simulation trajectory and related files for POPC/cholesterol (50 mol%) bilayer (Berger model delivered by Tieleman, modified Höltje, Gromacs 4.5)
Ollila, S. (Creator), Ferreira, T. (Creator) & Topgaard, D. (Creator), Zenodo, 2014
DOI: 10.5281/zenodo.605423, https://zenodo.org/record/605423
Dataset
-
MD simulation trajectory and related files for POPC bilayer with 950mM NaCl (CHARMM36, Gromacs 4.5)
Ollila, S. (Creator), Zenodo, 2015
DOI: 10.5281/zenodo.32498, https://zenodo.org/record/32498
Dataset
-
MD simulation trajectory and related files for POPC bilayer (Lipid14, Gromacs 4.5)
Ollila, S. (Creator) & Retegan, M. (Creator), Zenodo, 2014
DOI: 10.5281/zenodo.12767, https://zenodo.org/record/12767
Dataset